RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 RCVRNP35243 200 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 ARL3P36405 182 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 IER3P46695 156 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 INPP1P49441 399 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 RAB7AP51149 207 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 HERV-K104P61576 105 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 B2MP61769 119 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 CDK10Q15131 360 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 SLC9A3R2Q15599 337 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 Q3ZCU0 254 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 RPL39P5Q59GN2 51 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 ARSJQ5FYB0 599 aaPredicted RBP6.74□□□□□ -1.33
ERBB2-216ENST00000584014 SPANXN2Q5MJ10 180 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 PYHIN1Q6K0P9 492 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 CCDC144NLQ6NUI1 221 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 SLC25A48Q6ZT89 311 aaKnown RBP6.74□□□□□ -1.33
ERBB2-216ENST00000584014 TMEM17Q86X19 198 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 TMEM219Q86XT9 240 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 ZNF439Q8NDP4 499 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 OR5AP2Q8NGF4 316 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 GPX8Q8TED1 209 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 SECTM1Q8WVN6 248 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 SSMEM1Q8WWF3 244 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 SNAPC3Q92966 411 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 AJUBAQ96IF1 538 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 S1PR3Q99500 378 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 CHIAQ9BZP6 476 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 OR2D2Q9H210 308 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 SCPEP1Q9HB40 452 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 ESM1Q9NQ30 184 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 SLC35D1Q9NTN3 355 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 NAV3Q8IVL0 2385 aa6.74□□□□□ -1.33
ERBB2-216ENST00000584014 SAA2-SAA4A0A096LPE2 208 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 IGHV1-3A0A0C4DH29 117 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 ZNF736B4DX44 427 aaPredicted RBP6.73□□□□□ -1.33
ERBB2-216ENST00000584014 HSBP1L1C9JCN9 74 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 H7C2Y5 167 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 M0R1X1 148 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 SULT1C2O00338 296 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 RAB29O14966 203 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 SAA2P0DJI9 122 aaPredicted RBP6.73□□□□□ -1.33
ERBB2-216ENST00000584014 AADACP22760 399 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 HRH1P35367 487 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 LUMP51884 338 aaPredicted RBP6.73□□□□□ -1.33
ERBB2-216ENST00000584014 TAS2R46P59540 309 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 HILS1P60008 231 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 SSTP61278 116 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 ACTG1P63261 375 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 SRSF7Q16629 238 aaKnown RBP eCLIP6.73□□□□□ -1.33
ERBB2-216ENST00000584014 GLDNQ6ZMI3 551 aaPredicted RBP6.73□□□□□ -1.33
ERBB2-216ENST00000584014 LINC00311Q8N616 119 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 ZDHHC22Q8N966 263 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 OR6Q1Q8NGQ2 317 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 RTN4IP1Q8WWV3 396 aaPredicted RBP6.73□□□□□ -1.33
ERBB2-216ENST00000584014 CABLES2Q9BTV7 478 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 MEGF9Q9H1U4 602 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 PIPOXQ9P0Z9 390 aa6.73□□□□□ -1.33
ERBB2-216ENST00000584014 ANK3Q12955 4377 aaKnown RBP6.72□□□□□ -1.33
ERBB2-216ENST00000584014 A0A0A6YYJ9 748 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 FAM181BA6NEQ2 426 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 NCBP2LA6PVI3 153 aaKnown RBP6.72□□□□□ -1.33
ERBB2-216ENST00000584014 RNF212BA8MTL3 300 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 LY6LH3BQJ8 138 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 GABARAPH6UMI1 98 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 TNFSF12O43508 249 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 SLC25A17O43808 307 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 GPR137BO60478 399 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 RAB3DO95716 219 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 IGKV1D-33P01593 117 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 IGKV1-33P01594 117 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 LINC00205P59089 165 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 ACTBP60709 375 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 UBA52P62987 128 aaKnown RBP6.72□□□□□ -1.33
ERBB2-216ENST00000584014 SCGB2B2Q4G0G5 96 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 RNASE10Q5GAN6 216 aaKnown RBP6.72□□□□□ -1.33
ERBB2-216ENST00000584014 OR2B11Q5JQS5 317 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 C9orf152Q5JTZ5 239 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 ZNF57Q68EA5 555 aaPredicted RBP6.72□□□□□ -1.33
ERBB2-216ENST00000584014 DHRS7BQ6IAN0 325 aaPredicted RBP6.72□□□□□ -1.33
ERBB2-216ENST00000584014 FAAP20Q6NZ36 180 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 ZNF600Q6ZNG1 722 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 Q6ZS49 121 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 LDLRAD3Q86YD5 345 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 LYSMD2Q8IV50 215 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 H1FOOQ8IZA3 346 aaPredicted RBP6.72□□□□□ -1.33
ERBB2-216ENST00000584014 Q8N402 240 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 OR6F1Q8NGZ6 308 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 OR5R1Q8NH85 324 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 ZNF2Q9BSG1 426 aaPredicted RBP6.72□□□□□ -1.33
ERBB2-216ENST00000584014 THAP7Q9BT49 309 aaPredicted RBP6.72□□□□□ -1.33
ERBB2-216ENST00000584014 MRPL20Q9BYC9 149 aaKnown RBP6.72□□□□□ -1.33
ERBB2-216ENST00000584014 TINAGL1Q9GZM7 467 aaPredicted RBP6.72□□□□□ -1.33
ERBB2-216ENST00000584014 SLC5A7Q9GZV3 580 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 IFI27L2Q9H2X8 130 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 MCUBQ9NWR8 336 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 MTFP1Q9UDX5 166 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 VPREB3Q9UKI3 123 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 CBY1Q9Y3M2 126 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 OR2W1Q9Y3N9 320 aa6.72□□□□□ -1.33
ERBB2-216ENST00000584014 A3GALT2U3KPV4 340 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms