RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 ACTBP60709 375 aa1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 SNAP25P60880 206 aa1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 ACTG1P63261 375 aa1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 TPM4P67936 248 aa1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 BTN3A2P78410 334 aa1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 ZNHIT3Q15649 155 aaPredicted RBP1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 FAM9CQ8IZT9 166 aa1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 BLIDQ8IZY5 108 aa1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 OR7G1Q8NGA0 311 aa1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 LHFPL5Q8TAF8 219 aa1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 RBP7Q96R05 134 aa1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 BBS2Q9BXC9 721 aa1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 OR51B6Q9H340 312 aa1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 PRO2289Q9P1D8 64 aa1.36□□□□□ -2.19
PPP4R1-227ENST00000583988 CR1P17927 2039 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 PLCH2O75038 1416 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 DAPL1A0PJW8 107 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 C2orf74A8MZ97 194 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 FTCDNL1E5RQL4 147 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 NDUFB2O95178 105 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 ORM1P02763 201 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 CCL3P10147 92 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 CD24P25063 80 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 PLEKHG7Q6ZR37 379 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 LFNGQ8NES3 379 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 OR5L1Q8NGL2 311 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 CPNE2Q96FN4 548 aaPredicted RBP1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 TMEM208Q9BTX3 173 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 HDHD2Q9H0R4 259 aa1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 SPANXB1Q9NS25 103 aaPredicted RBP1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 MDC1Q14676 2089 aaKnown RBP1.35□□□□□ -2.19
PPP4R1-227ENST00000583988 VPS37CA5D8V6 355 aaPredicted RBP1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 GOLGA6L10A6NI86 522 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 SMLR1H3BR10 107 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 CCRL2O00421 344 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 ZW10O43264 779 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 GNRH2O43555 120 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 LINC00614P0C842 121 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 RD3LP0DJH9 198 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 OR10J1P30954 320 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 CA7P43166 264 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 SKP1P63208 163 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 ZNF90Q03938 601 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 EBPQ15125 230 aaKnown RBP1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 DNAL1Q4LDG9 190 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 HSP90B2PQ58FF3 399 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 PABPC1L2AQ5JQF8 200 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 N4BP2L1Q5TBK1 243 aaPredicted RBP1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 Q6ZS52 159 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 BOD1L2Q8IYS8 172 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 MS4A6EQ96DS6 147 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 C7orf50Q9BRJ6 194 aaKnown RBP1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 MIEN1Q9BRT3 115 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 PECRQ9BY49 303 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 PARVAQ9NVD7 372 aa1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 KLK5Q9Y337 293 aaPredicted RBP1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 PUS1Q9Y606 427 aaKnown RBP eCLIP1.34□□□□□ -2.19
PPP4R1-227ENST00000583988 REREQ9P2R6 1566 aa1.34□□□□□ -2.2
PPP4R1-227ENST00000583988 NCKAP5O14513 1909 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 TRAV8-1A0A0A6YYK1 113 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 METTL15A6NJ78 407 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 SIGLEC16A6NMB1 481 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 GSTZ1O43708 216 aaPredicted RBP1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 STX10O60499 249 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 NDUFS6O75380 124 aaKnown RBP1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 ATP6V1G2O95670 118 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 UCHL1P09936 223 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 PSMB6P28072 239 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 CD40LGP29965 261 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 MIPP30301 263 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 ADORA1P30542 326 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 RELAQ04206 551 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 SDHAF4Q5VUM1 108 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 SPATA31B1PQ5VZV4 182 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 LCN8Q6JVE9 175 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 XKRXQ6PP77 449 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 AGTRAPQ6RW13 159 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 AMTNQ6UX39 209 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 GLT6D1Q7Z4J2 308 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 GPR22Q99680 433 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 DRC3Q9H069 523 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 TP53TG1Q9Y2A0 90 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 RAD50Q92878 1312 aa1.33□□□□□ -2.2
PPP4R1-227ENST00000583988 DENND4BO75064 1496 aaPredicted RBP1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 FBN3Q75N90 2809 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 DISP1Q96F81 1524 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 A0A0A6YYH2 397 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 A0A0G2JQZ4 141 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 C1orf232A0A0U1RR37 186 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 ARRDC5A6NEK1 342 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 ZNF860A6NHJ4 632 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 A6NJ64 397 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 OR5K4A6NMS3 321 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 OR11H12B2RN74 326 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 ASS1P00966 412 aaKnown RBP1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 CD79BP40259 229 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 XCL1P47992 114 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 Q6ZTI0 123 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 C2orf91Q6ZV80 131 aa1.32□□□□□ -2.2
PPP4R1-227ENST00000583988 FUNDC1Q8IVP5 155 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms