RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 VEGFCP49767 419 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 PLA2G7Q13093 441 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 ASPHD1Q5U4P2 390 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 OR10R2Q8NGX6 335 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 LGALS14Q8TCE9 139 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 NEK7Q8TDX7 302 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 UBE2E2Q96LR5 201 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 RAB9BQ9NP90 201 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 RHBDL2Q9NX52 303 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 GAR1Q9NY12 217 aaKnown RBP10.55□□□□□ -0.72
SS18-222ENST00000582792 ZNF736B4DX44 427 aaPredicted RBP10.54□□□□□ -0.72
SS18-222ENST00000582792 C15orf65H3BRN8 121 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 I3L521 148 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 SDCBPO00560 298 aaPredicted RBP10.54□□□□□ -0.72
SS18-222ENST00000582792 ZNF182P17025 639 aaPredicted RBP10.54□□□□□ -0.72
SS18-222ENST00000582792 F2RL1P55085 397 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 RUNX1Q01196 453 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 ZNF616Q08AN1 781 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 KIAA0141Q14154 515 aaPredicted RBP10.54□□□□□ -0.72
SS18-222ENST00000582792 TMEM30BQ3MIR4 351 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 C6orf183Q5T699 404 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 ZNF880Q6PDB4 577 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 OVCH2Q7RTZ1 564 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 C6orf201Q7Z4U5 140 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 ZNF429Q86V71 674 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 OR1N2Q8NGR9 330 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 AP3S1Q92572 193 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 ARL11Q969Q4 196 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 ISOC1Q96CN7 298 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 RAB3CQ96E17 227 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 SULT4A1Q9BR01 284 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 PECRQ9BY49 303 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 GNB4Q9HAV0 340 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 PALMDQ9NP74 551 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 MBNL3Q9NUK0 354 aaKnown RBP10.54□□□□□ -0.72
SS18-222ENST00000582792 GFOD1Q9NXC2 390 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 NDUFA13Q9P0J0 144 aa10.54□□□□□ -0.72
SS18-222ENST00000582792 UBE2QL1A1L167 161 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 TXNL1O43396 289 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 NAPSAO96009 420 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 FRMD6-AS1P0C7T7 363 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 HIST1H1DP16402 221 aaKnown RBP10.53□□□□□ -0.72
SS18-222ENST00000582792 PPIFP30405 207 aaKnown RBP10.53□□□□□ -0.72
SS18-222ENST00000582792 ZNF137PP52743 207 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 Q3ZCU0 254 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 PLAC9Q5JTB6 97 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 FAM53AQ6NSI3 398 aaPredicted RBP10.53□□□□□ -0.72
SS18-222ENST00000582792 MZT2AQ6P582 158 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 TMEM65Q6PI78 240 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 MOB1BQ7L9L4 216 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 ZNF491Q8N8L2 437 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 OR5H6Q8NGV6 325 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 UBALD1Q8TB05 177 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 MRPL30Q8TCC3 161 aaKnown RBP10.53□□□□□ -0.72
SS18-222ENST00000582792 SLC25A38Q96DW6 304 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 ARHGAP5-AS1Q96IT6 56 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 FAAP24Q9BTP7 215 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 RBM38Q9H0Z9 239 aaKnown RBP10.53□□□□□ -0.72
SS18-222ENST00000582792 ATG5Q9H1Y0 275 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 KLK15Q9H2R5 256 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 ZMAT4Q9H898 229 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 CCDC59Q9P031 241 aaKnown RBP10.53□□□□□ -0.72
SS18-222ENST00000582792 ZNF107Q9UII5 783 aaPredicted RBP10.53□□□□□ -0.72
SS18-222ENST00000582792 MGAT4AQ9UM21 535 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 VSIG4Q9Y279 399 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 STARD9Q9P2P6 4700 aa10.53□□□□□ -0.72
SS18-222ENST00000582792 IGHV3-43A0A0B4J1X8 118 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 SMIM31A0A1B0GVY4 71 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 H3BMQ9 156 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 MFNGO00587 321 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 SLC31A2O15432 143 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 GSTP1P09211 210 aaKnown RBP10.52□□□□□ -0.73
SS18-222ENST00000582792 IGHV3-43DP0DP04 118 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 GNB1P62873 340 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 SPCS2Q15005 226 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 SRSF7Q16629 238 aaKnown RBP eCLIP10.52□□□□□ -0.73
SS18-222ENST00000582792 MOGAT2Q3SYC2 334 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 UBE2NLQ5JXB2 153 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 SLC25A48Q6ZT89 311 aaKnown RBP10.52□□□□□ -0.73
SS18-222ENST00000582792 DCUN1D4Q92564 292 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 RBMXL1Q96E39 390 aaKnown RBP10.52□□□□□ -0.73
SS18-222ENST00000582792 CITED4Q96RK1 184 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 DIABLOQ9NR28 239 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 AK3Q9UIJ7 227 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 TRAPPC2LQ9UL33 140 aa10.52□□□□□ -0.73
SS18-222ENST00000582792 OVOL1O14753 267 aa10.51□□□□□ -0.73
SS18-222ENST00000582792 IGLV1-40P01703 118 aa10.51□□□□□ -0.73
SS18-222ENST00000582792 ZNF439Q8NDP4 499 aa10.51□□□□□ -0.73
SS18-222ENST00000582792 DYNC2LI1Q8TCX1 351 aa10.51□□□□□ -0.73
SS18-222ENST00000582792 CCDC107Q8WV48 283 aa10.51□□□□□ -0.73
SS18-222ENST00000582792 S100A16Q96FQ6 103 aaKnown RBP10.51□□□□□ -0.73
SS18-222ENST00000582792 OR5B12Q96R08 314 aa10.51□□□□□ -0.73
SS18-222ENST00000582792 CMSS1Q9BQ75 279 aaKnown RBP10.51□□□□□ -0.73
SS18-222ENST00000582792 C12orf4Q9NQ89 552 aa10.51□□□□□ -0.73
SS18-222ENST00000582792 KCNIP1Q9NZI2 227 aa10.51□□□□□ -0.73
SS18-222ENST00000582792 RSL24D1Q9UHA3 163 aaKnown RBP10.51□□□□□ -0.73
SS18-222ENST00000582792 KCNK7Q9Y2U2 307 aa10.51□□□□□ -0.73
SS18-222ENST00000582792 WSB1Q9Y6I7 421 aa10.51□□□□□ -0.73
SS18-222ENST00000582792 G3V318 75 aa10.5□□□□□ -0.73
SS18-222ENST00000582792 SPINT2O43291 252 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms