RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 DCTN5Q9BTE1 182 aa18.83■□□□□ 0.6
CCDC47-204ENST00000582252 WFDC1Q9HC57 220 aa18.83■□□□□ 0.6
CCDC47-204ENST00000582252 CALYQ9NYX4 217 aa18.83■□□□□ 0.6
CCDC47-204ENST00000582252 NDRG3Q9UGV2 375 aa18.83■□□□□ 0.6
CCDC47-204ENST00000582252 TRGV10A0A0A0MS01 117 aa18.82■□□□□ 0.6
CCDC47-204ENST00000582252 LGALS8O00214 317 aa18.82■□□□□ 0.6
CCDC47-204ENST00000582252 ITGB1BP1O14713 200 aa18.82■□□□□ 0.6
CCDC47-204ENST00000582252 RAB5CP51148 216 aa18.82■□□□□ 0.6
CCDC47-204ENST00000582252 TMEM30BQ3MIR4 351 aa18.82■□□□□ 0.6
CCDC47-204ENST00000582252 MORN2Q502X0 79 aa18.82■□□□□ 0.6
CCDC47-204ENST00000582252 SPAG16Q8N0X2 631 aa18.82■□□□□ 0.6
CCDC47-204ENST00000582252 FGFRL1Q8N441 504 aa18.82■□□□□ 0.6
CCDC47-204ENST00000582252 PARP11Q9NR21 331 aa18.82■□□□□ 0.6
CCDC47-204ENST00000582252 WSB1Q9Y6I7 421 aa18.82■□□□□ 0.6
CCDC47-204ENST00000582252 ZG16O60844 167 aa18.81■□□□□ 0.6
CCDC47-204ENST00000582252 SPP1P10451 314 aa18.81■□□□□ 0.6
CCDC47-204ENST00000582252 FAM201AQ5SY85 155 aa18.81■□□□□ 0.6
CCDC47-204ENST00000582252 ZNF788Q6ZQV5 615 aa18.81■□□□□ 0.6
CCDC47-204ENST00000582252 GAFA1Q96PS6 74 aa18.81■□□□□ 0.6
CCDC47-204ENST00000582252 DYSFO75923 2080 aa18.81■□□□□ 0.6
CCDC47-204ENST00000582252 TRAV38-1A0A0B4J264 116 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 TOR1AO14656 332 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 ST8SIA5O15466 376 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 SYNGR2O43760 224 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 NXPH3O95157 252 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 CLDN14O95500 239 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 CRYZL1O95825 349 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 RAB7AP51149 207 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 CCL8P80075 99 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 LTC4SQ16873 150 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 Q3ZCU0 254 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 PXDC1Q5TGL8 231 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 ITLN2Q8WWU7 325 aaPredicted RBP18.8■□□□□ 0.6
CCDC47-204ENST00000582252 C5orf30Q96GV9 206 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 SAP30LQ9HAJ7 183 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 FLNCQ14315 2725 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 ROS1P08922 2347 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 RAI1Q7Z5J4 1906 aaPredicted RBP18.8■□□□□ 0.6
CCDC47-204ENST00000582252 ICE1Q9Y2F5 2266 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 DEFB108AA8MXU0 73 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 F2RL1P55085 397 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 TAS2R30P59541 319 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 RPL30P62888 115 aaKnown RBP18.8■□□□□ 0.6
CCDC47-204ENST00000582252 TFF3Q07654 80 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 Q6ZRM9 215 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 AGMATQ9BSE5 352 aa18.8■□□□□ 0.6
CCDC47-204ENST00000582252 STRAPQ9Y3F4 350 aaKnown RBP18.8■□□□□ 0.6
CCDC47-204ENST00000582252 KIAA1324LA8MWY0 1029 aaPredicted RBP18.79■□□□□ 0.6
CCDC47-204ENST00000582252 SIGLEC5O15389 551 aa18.79■□□□□ 0.6
CCDC47-204ENST00000582252 DFFBO76075 338 aa18.79■□□□□ 0.6
CCDC47-204ENST00000582252 CD3EP07766 207 aa18.79■□□□□ 0.6
CCDC47-204ENST00000582252 PJVKQ0ZLH3 352 aa18.79■□□□□ 0.6
CCDC47-204ENST00000582252 DEFB108BQ8NET1 73 aa18.79■□□□□ 0.6
CCDC47-204ENST00000582252 ARID1AO14497 2285 aa18.79■□□□□ 0.6
CCDC47-204ENST00000582252 KBTBD11-OT1A0A1B0GTJ5 212 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 SHISA9B4DS77 424 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 GYPAP02724 150 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 CGB3P0DN86 165 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 CGB7P0DN87 165 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 OMGP23515 440 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 GRNP28799 593 aaKnown RBP18.78■□□□□ 0.6
CCDC47-204ENST00000582252 PAX9P55771 341 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 ZNF816Q0VGE8 651 aaPredicted RBP18.78■□□□□ 0.6
CCDC47-204ENST00000582252 FAM53AQ6NSI3 398 aaPredicted RBP18.78■□□□□ 0.6
CCDC47-204ENST00000582252 BTNL3Q6UXE8 466 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 OR5C1Q8NGR4 320 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 PLPPR2Q96GM1 343 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 CCL13Q99616 98 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 MS4A5Q9H3V2 200 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 DYNLRB1Q9NP97 96 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 CLN8Q9UBY8 286 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 DOPEY1Q5JWR5 2465 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 TANC2Q9HCD6 1990 aa18.78■□□□□ 0.6
CCDC47-204ENST00000582252 ZNF729A6NN14 1252 aaPredicted RBP18.77■□□□□ 0.6
CCDC47-204ENST00000582252 RAB29O14966 203 aa18.77■□□□□ 0.6
CCDC47-204ENST00000582252 RAMP3O60896 148 aa18.77■□□□□ 0.6
CCDC47-204ENST00000582252 TMEM50AO95807 157 aa18.77■□□□□ 0.6
CCDC47-204ENST00000582252 SULT1A1P50225 295 aa18.77■□□□□ 0.6
CCDC47-204ENST00000582252 DYNLT3P51808 116 aa18.77■□□□□ 0.6
CCDC47-204ENST00000582252 LOXL3P58215 753 aa18.77■□□□□ 0.6
CCDC47-204ENST00000582252 CLINT1Q14677 625 aa18.77■□□□□ 0.6
CCDC47-204ENST00000582252 TUSC1Q2TAM9 212 aa18.77■□□□□ 0.6
CCDC47-204ENST00000582252 MST1LQ2TV78 715 aa18.77■□□□□ 0.6
CCDC47-204ENST00000582252 NARS2Q96I59 477 aaKnown RBP18.77■□□□□ 0.6
CCDC47-204ENST00000582252 GAB2Q9UQC2 676 aa18.77■□□□□ 0.6
CCDC47-204ENST00000582252 C17orf98A8MV24 154 aa18.77■□□□□ 0.59
CCDC47-204ENST00000582252 TXNL1O43396 289 aa18.77■□□□□ 0.59
CCDC47-204ENST00000582252 DANCRP0C864 163 aa18.77■□□□□ 0.59
CCDC47-204ENST00000582252 APOBEC3AP31941 199 aaPredicted RBP18.77■□□□□ 0.59
CCDC47-204ENST00000582252 KIR2DS2P43631 304 aa18.77■□□□□ 0.59
CCDC47-204ENST00000582252 OR2B11Q5JQS5 317 aa18.77■□□□□ 0.59
CCDC47-204ENST00000582252 Q6ZRG5 221 aa18.77■□□□□ 0.59
CCDC47-204ENST00000582252 HSD17B11Q8NBQ5 300 aa18.77■□□□□ 0.59
CCDC47-204ENST00000582252 BPIFCQ8NFQ6 507 aa18.77■□□□□ 0.59
CCDC47-204ENST00000582252 CORO2AQ92828 525 aa18.77■□□□□ 0.59
CCDC47-204ENST00000582252 ATP5SQ99766 215 aa18.77■□□□□ 0.59
CCDC47-204ENST00000582252 HRH4Q9H3N8 390 aa18.77■□□□□ 0.59
CCDC47-204ENST00000582252 NARFLQ9H6Q4 476 aa18.77■□□□□ 0.59
CCDC47-204ENST00000582252 GFOD1Q9NXC2 390 aa18.77■□□□□ 0.59
CCDC47-204ENST00000582252 PSENENQ9NZ42 101 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms