RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 DEDDO75618 318 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 KIR2DS2P43631 304 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 PPOXP50336 477 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 RPL23AP62750 156 aaKnown RBP7.71□□□□□ -1.18
SS18-220ENST00000582092 RPL31P62899 125 aaKnown RBP7.71□□□□□ -1.18
SS18-220ENST00000582092 DEFB113Q30KQ7 82 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 Q3ZCU0 254 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 MORN2Q502X0 79 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 FAM216BQ8N7L0 139 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 SCARB1Q8WTV0 552 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 NEU4Q8WWR8 484 aaPredicted RBP7.71□□□□□ -1.18
SS18-220ENST00000582092 RAB1CQ92928 201 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 LSM10Q969L4 123 aaKnown RBP7.71□□□□□ -1.18
SS18-220ENST00000582092 ABHD14BQ96IU4 210 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 RNF126Q9BV68 326 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 TOLLIPQ9H0E2 274 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 UBTD1Q9HAC8 227 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 TAS2R3Q9NYW6 316 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 OR5AC2Q9NZP5 309 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 POMT1Q9Y6A1 747 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 F8P00451 2351 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 LRBAP50851 2863 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 CADP27708 2225 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 C15orf65H3BRN8 121 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 F2RL2O00254 374 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 ST8SIA5O15466 376 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 GPR137BO60478 399 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 MED6O75586 246 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 MBPP02686 304 aaPredicted RBP7.7□□□□□ -1.18
SS18-220ENST00000582092 WNT2P09544 360 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 SLC25A6P12236 298 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 LYL1P12980 280 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 P2RY1P47900 373 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 ERVK-16P61578 105 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 SWI5Q1ZZU3 235 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 CR1LQ2VPA4 569 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 GPR157Q5UAW9 335 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 BTNL3Q6UXE8 466 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 OR10A7Q8NGE5 316 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 OR52M1Q8NGK5 317 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 CORO2AQ92828 525 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 AQP10Q96PS8 301 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 CLCC1Q96S66 551 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 GPHA2Q96T91 129 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 S1PR3Q99500 378 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 CCL19Q99731 98 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 HEXA-AS1Q9H8Q6 139 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 FAM212BQ9NTI7 297 aaPredicted RBP7.7□□□□□ -1.18
SS18-220ENST00000582092 RCL1Q9Y2P8 373 aaKnown RBP7.7□□□□□ -1.18
SS18-220ENST00000582092 LINC00312Q9Y6C7 94 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 PDZD2O15018 2839 aa7.7□□□□□ -1.18
SS18-220ENST00000582092 KIAA2026Q5HYC2 2103 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 hCG_1809904A0A1W2PP81 198 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 A0A1W2PPE2 198 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 A0A1W2PR64 198 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 A0A1W2PRV1 198 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 RNF222A6NCQ9 220 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 M0R1X1 148 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 ITGB1BP1O14713 200 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 RAB29O14966 203 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 SSSCA1O60232 199 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 SELLP14151 372 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 CD99P14209 185 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 MMP9P14780 707 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 DAOP14920 347 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 OMGP23515 440 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 CAV2P51636 162 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 ZNF816Q0VGE8 651 aaPredicted RBP7.69□□□□□ -1.18
SS18-220ENST00000582092 MST1LQ2TV78 715 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 ALKAL2Q6UX46 152 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 H2BFWTQ7Z2G1 175 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 TGIF2LYQ8IUE0 185 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 FAM219AQ8IW50 185 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 PDZD9Q8IXQ8 264 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 SPAG16Q8N0X2 631 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 LRRC75A-AS1Q8N1F1 130 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.69□□□□□ -1.18
SS18-220ENST00000582092 LHFPL5Q8TAF8 219 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 LRRC20Q8TCA0 184 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 ST8SIA2Q92186 375 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 PHYHIPLQ96FC7 376 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 ADTRPQ96IZ2 230 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 ZNF714Q96N38 554 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 ABHD14AQ9BUJ0 271 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 GSX2Q9BZM3 304 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 GFOD1Q9NXC2 390 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 PFDN2Q9UHV9 154 aa7.69□□□□□ -1.18
SS18-220ENST00000582092 NBPF19A0A087WUL8 3843 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 RAI1Q7Z5J4 1906 aaPredicted RBP7.68□□□□□ -1.18
SS18-220ENST00000582092 FBN2P35556 2912 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 H0YIZ8 118 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 DVL1O14640 695 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 PPIHO43447 177 aaKnown RBP7.68□□□□□ -1.18
SS18-220ENST00000582092 JTBO76095 146 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 KRASP01116 189 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 COL8A2P25067 703 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 IL3RAP26951 378 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 GNG10P50151 68 aa7.68□□□□□ -1.18
SS18-220ENST00000582092 MRPS11P82912 194 aaKnown RBP7.68□□□□□ -1.18
SS18-220ENST00000582092 IL15RAQ13261 267 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms