RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 NEDD4LQ96PU5 975 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 GON7Q9BXV9 100 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 PLSCR3Q9NRY6 295 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 KCNK7Q9Y2U2 307 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 V9GYH0 126 aa16.48■□□□□ 0.23
CCDC42-203ENST00000581598 TRAV18A0A075B6X5 111 aa16.47■□□□□ 0.23
CCDC42-203ENST00000581598 HLA-DQB1P01920 261 aa16.47■□□□□ 0.23
CCDC42-203ENST00000581598 RCC1P18754 421 aaPredicted RBP16.47■□□□□ 0.23
CCDC42-203ENST00000581598 MYCNOSP40205 109 aa16.47■□□□□ 0.23
CCDC42-203ENST00000581598 EGFEM1PQ0D2K5 195 aa16.47■□□□□ 0.23
CCDC42-203ENST00000581598 ARL6IP1Q15041 203 aa16.47■□□□□ 0.23
CCDC42-203ENST00000581598 ZNF260Q3ZCT1 412 aa16.47■□□□□ 0.23
CCDC42-203ENST00000581598 TEX38Q6PEX7 206 aa16.47■□□□□ 0.23
CCDC42-203ENST00000581598 OR1L1Q8NH94 360 aa16.47■□□□□ 0.23
CCDC42-203ENST00000581598 PECRQ9BY49 303 aa16.47■□□□□ 0.23
CCDC42-203ENST00000581598 LINC00527Q9UJ94 153 aa16.47■□□□□ 0.23
CCDC42-203ENST00000581598 LANCL1O43813 399 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 GSTP1P09211 210 aaKnown RBP16.46■□□□□ 0.23
CCDC42-203ENST00000581598 PTBP1P26599 531 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCDC42-203ENST00000581598 PNLIPRP3Q17RR3 467 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 MORN2Q502X0 79 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 SPANXN2Q5MJ10 180 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 LY6G6FQ5SQ64 297 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 C6orf201Q7Z4U5 140 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 FAM71E2Q8N5Q1 922 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 CYYR1Q96J86 154 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 S1PR3Q99500 378 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 P2RX4Q99571 388 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 SULT4A1Q9BR01 284 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 MCRIP2Q9BUT9 160 aaKnown RBP16.46■□□□□ 0.23
CCDC42-203ENST00000581598 AUNIPQ9H7T9 357 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 TAF9BQ9HBM6 251 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 PLEKHJ1Q9NW61 149 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 ZNF580Q9UK33 172 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 JPT1Q9UK76 154 aa16.46■□□□□ 0.23
CCDC42-203ENST00000581598 FABP12A6NFH5 140 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 LINC01548A6NM66 108 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 GNB3P16520 340 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 HTD2P86397 168 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 CDNFQ49AH0 187 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 NKAPLQ5M9Q1 402 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 PYHIN1Q6K0P9 492 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 PRR18Q8N4B5 295 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 RNF152Q8N8N0 203 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 OR10V1Q8NGI7 309 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 MRPL30Q8TCC3 161 aaKnown RBP16.45■□□□□ 0.22
CCDC42-203ENST00000581598 S100ZQ8WXG8 99 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 RASL11BQ9BPW5 248 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 OR2S2Q9NQN1 319 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 KCNIP1Q9NZI2 227 aa16.45■□□□□ 0.22
CCDC42-203ENST00000581598 UBE2QL1A1L167 161 aa16.44■□□□□ 0.22
CCDC42-203ENST00000581598 ZNF736B4DX44 427 aaPredicted RBP16.44■□□□□ 0.22
CCDC42-203ENST00000581598 K7EIL1 84 aa16.44■□□□□ 0.22
CCDC42-203ENST00000581598 ZNF45Q02386 682 aa16.44■□□□□ 0.22
CCDC42-203ENST00000581598 ZNF79Q15937 498 aa16.44■□□□□ 0.22
CCDC42-203ENST00000581598 C18orf65Q6ZTR6 163 aa16.44■□□□□ 0.22
CCDC42-203ENST00000581598 C8orf86Q6ZUL3 223 aa16.44■□□□□ 0.22
CCDC42-203ENST00000581598 ZNF695Q8IW36 515 aa16.44■□□□□ 0.22
CCDC42-203ENST00000581598 KLHL30-AS1Q8NEE0 82 aa16.44■□□□□ 0.22
CCDC42-203ENST00000581598 C15orf40Q8WUR7 153 aa16.44■□□□□ 0.22
CCDC42-203ENST00000581598 ABHD1Q96SE0 405 aa16.44■□□□□ 0.22
CCDC42-203ENST00000581598 FAAP24Q9BTP7 215 aa16.44■□□□□ 0.22
CCDC42-203ENST00000581598 TMEM235A6NFC5 223 aa16.43■□□□□ 0.22
CCDC42-203ENST00000581598 NUDT19A8MXV4 375 aa16.43■□□□□ 0.22
CCDC42-203ENST00000581598 CTDSPLO15194 276 aa16.43■□□□□ 0.22
CCDC42-203ENST00000581598 YPEL1O60688 119 aa16.43■□□□□ 0.22
CCDC42-203ENST00000581598 ELANEP08246 267 aa16.43■□□□□ 0.22
CCDC42-203ENST00000581598 KRTAP10-11P60412 298 aa16.43■□□□□ 0.22
CCDC42-203ENST00000581598 FOXE3Q13461 319 aa16.43■□□□□ 0.22
CCDC42-203ENST00000581598 IL18Q14116 193 aa16.43■□□□□ 0.22
CCDC42-203ENST00000581598 HACD4Q5VWC8 232 aa16.43■□□□□ 0.22
CCDC42-203ENST00000581598 FAM131AQ6UXB0 335 aa16.43■□□□□ 0.22
CCDC42-203ENST00000581598 DPF1Q92782 380 aa16.43■□□□□ 0.22
CCDC42-203ENST00000581598 YPEL2Q96QA6 119 aa16.43■□□□□ 0.22
CCDC42-203ENST00000581598 F2RL1P55085 397 aa16.42■□□□□ 0.22
CCDC42-203ENST00000581598 PITPNAQ00169 270 aa16.42■□□□□ 0.22
CCDC42-203ENST00000581598 CFHR3Q02985 330 aa16.42■□□□□ 0.22
CCDC42-203ENST00000581598 TSC22D3Q99576 134 aa16.42■□□□□ 0.22
CCDC42-203ENST00000581598 ABHD14AQ9BUJ0 271 aa16.42■□□□□ 0.22
CCDC42-203ENST00000581598 SRRQ9GZT4 340 aa16.42■□□□□ 0.22
CCDC42-203ENST00000581598 AK3Q9UIJ7 227 aa16.42■□□□□ 0.22
CCDC42-203ENST00000581598 ELF5Q9UKW6 265 aaPredicted RBP16.42■□□□□ 0.22
CCDC42-203ENST00000581598 MRPS7Q9Y2R9 242 aaKnown RBP16.42■□□□□ 0.22
CCDC42-203ENST00000581598 RGS11O94810 467 aa16.41■□□□□ 0.22
CCDC42-203ENST00000581598 IGF1P05019 195 aa16.41■□□□□ 0.22
CCDC42-203ENST00000581598 PTHLHP12272 177 aa16.41■□□□□ 0.22
CCDC42-203ENST00000581598 CDX1P47902 265 aaPredicted RBP16.41■□□□□ 0.22
CCDC42-203ENST00000581598 MRPS10P82664 201 aaKnown RBP16.41■□□□□ 0.22
CCDC42-203ENST00000581598 GNMTQ14749 295 aa16.41■□□□□ 0.22
CCDC42-203ENST00000581598 HMGN3Q15651 99 aa16.41■□□□□ 0.22
CCDC42-203ENST00000581598 CXorf66Q5JRM2 361 aaPredicted RBP16.41■□□□□ 0.22
CCDC42-203ENST00000581598 SNX29P2Q8IUI4 249 aa16.41■□□□□ 0.22
CCDC42-203ENST00000581598 ODF3L1Q8IXM7 274 aa16.41■□□□□ 0.22
CCDC42-203ENST00000581598 OR52L2PQ8NGH6 319 aa16.41■□□□□ 0.22
CCDC42-203ENST00000581598 GALMQ96C23 342 aa16.41■□□□□ 0.22
CCDC42-203ENST00000581598 WDR12Q9GZL7 423 aaKnown RBP16.41■□□□□ 0.22
CCDC42-203ENST00000581598 SULT1C2O00338 296 aa16.4■□□□□ 0.22
CCDC42-203ENST00000581598 SSX5O60225 188 aa16.4■□□□□ 0.22
CCDC42-203ENST00000581598 NAPSAO96009 420 aa16.4■□□□□ 0.22
CCDC42-203ENST00000581598 IGHG4P01861 327 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms