RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 MC5RP33032 325 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 CBX3Q13185 183 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 ABCA11PQ4W5N1 156 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 UTF1Q5T230 341 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 RUSC1-AS1Q66K80 236 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 ZNF66Q6ZN08 573 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 ZNF833PQ6ZTB9 187 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 Q71RC1 249 aaPredicted RBP11.57□□□□□ -0.56
SKA2-205ENST00000580541 LHFPL4Q7Z7J7 247 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 LHFPL1Q86WI0 220 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 RTN4IP1Q8WWV3 396 aaPredicted RBP11.57□□□□□ -0.56
SKA2-205ENST00000580541 ST6GALNAC6Q969X2 333 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 HSD17B10Q99714 261 aaKnown RBP11.57□□□□□ -0.56
SKA2-205ENST00000580541 PARP12Q9H0J9 701 aaKnown RBP11.57□□□□□ -0.56
SKA2-205ENST00000580541 DPAGT1Q9H3H5 408 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 SDHAF2Q9NX18 166 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 COPZ2Q9P299 210 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 C14orf166Q9Y224 244 aaKnown RBP11.57□□□□□ -0.56
SKA2-205ENST00000580541 PRELID3BQ9Y3B1 194 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 MAST4O15021 2626 aa11.57□□□□□ -0.56
SKA2-205ENST00000580541 SONP18583 2426 aaKnown RBP11.57□□□□□ -0.56
SKA2-205ENST00000580541 A0A0U1RQK1 487 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 OR5H14A6NHG9 310 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 INAFM1C9JVW0 142 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 CRLF1O75462 422 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 FAM157CP0CG43 387 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 FAM106CPP0CH98 169 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 RRASP10301 218 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 GNRHRP30968 328 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 THBS3P49746 956 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 DYNLT3P51808 116 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 CATR1Q13166 79 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 ASAH1Q13510 395 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 RBMS2Q15434 407 aaKnown RBP11.56□□□□□ -0.56
SKA2-205ENST00000580541 AADACL3Q5VUY0 350 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 FAAP20Q6NZ36 180 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 IL17RELQ6ZVW7 336 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 MOB3BQ86TA1 216 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 ODF3L1Q8IXM7 274 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 CCDC71LQ8N9Z2 235 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 POC5Q8NA72 575 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 BVESQ8NE79 360 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 ZNF418Q8TF45 676 aaPredicted RBP11.56□□□□□ -0.56
SKA2-205ENST00000580541 RSRP1Q9BUV0 290 aa11.56□□□□□ -0.56
SKA2-205ENST00000580541 IGKV1D-13A0A0B4J2D9 117 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 IGHV1-3A0A0C4DH29 117 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 FAM240BA0A1B0GVZ2 78 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 VGLL3A8MV65 326 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 M0R1X1 148 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 APOA2P02652 100 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 IGKV1-13P0DP09 117 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 RAB13P51153 203 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 DCTN2Q13561 401 aaKnown RBP11.55□□□□□ -0.56
SKA2-205ENST00000580541 DRAM1Q8N682 238 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 TCTEX1D1Q8N7M0 179 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 ZDHHC22Q8N966 263 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 OR5R1Q8NH85 324 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 JMJD8Q96S16 334 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 PRDM13Q9H4Q3 707 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 CCL28Q9NRJ3 127 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 ZNRD1Q9P1U0 126 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 PITPNC1Q9UKF7 332 aa11.55□□□□□ -0.56
SKA2-205ENST00000580541 PLA2G10O15496 165 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 B3GALNT1O75752 331 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 CTSDP07339 412 aaPredicted RBP11.54□□□□□ -0.56
SKA2-205ENST00000580541 CD1BP29016 333 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 KIR2DS2P43631 304 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 RTL8BQ17RB0 113 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 LRRC75BQ2VPJ9 315 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 DEFB112Q30KQ8 113 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 RPL39P5Q59GN2 51 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 THNSL2Q86YJ6 484 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 MARCH1Q8TCQ1 289 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 CD300LFQ8TDQ1 290 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 SSMEM1Q8WWF3 244 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 C22orf15Q8WYQ4 148 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 SSX3Q99909 188 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 AIFM2Q9BRQ8 373 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 GPR132Q9UNW8 380 aa11.54□□□□□ -0.56
SKA2-205ENST00000580541 A0A0A6YYJ9 748 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 PIGBOS1A0A0B4J2F0 54 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 IFNA2P01563 188 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 REG1BP48304 166 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 RND3P61587 244 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 Q6YL49 198 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 ZNF818PQ6ZRF7 136 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 LDLRAD3Q86YD5 345 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 BCL6BQ8N143 479 aaPredicted RBP11.53□□□□□ -0.56
SKA2-205ENST00000580541 TMEM86BQ8N661 226 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 OR13C8Q8NGS7 320 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 ENKURQ8TC29 256 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 NABP2Q9BQ15 211 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 ZNF251Q9BRH9 671 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 FXYD6Q9H0Q3 95 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 KCNIP3Q9Y2W7 256 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 POMT1Q9Y6A1 747 aa11.53□□□□□ -0.56
SKA2-205ENST00000580541 H7C2Y5 167 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 TIMM23O14925 209 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 PGLYRP1O75594 196 aaPredicted RBP11.52□□□□□ -0.57
SKA2-205ENST00000580541 NDUFB6O95139 128 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms