RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 C18orf65Q6ZTR6 163 aa10.49□□□□□ -0.73
TRAF4-214ENST00000580073 Q8N6K4 173 aa10.49□□□□□ -0.73
TRAF4-214ENST00000580073 SAMD12Q8N8I0 201 aa10.49□□□□□ -0.73
TRAF4-214ENST00000580073 Q8N9W7 124 aa10.49□□□□□ -0.73
TRAF4-214ENST00000580073 OR52L2PQ8NGH6 319 aa10.49□□□□□ -0.73
TRAF4-214ENST00000580073 RTN4IP1Q8WWV3 396 aaPredicted RBP10.49□□□□□ -0.73
TRAF4-214ENST00000580073 MAFIPQ8WZ33 124 aa10.49□□□□□ -0.73
TRAF4-214ENST00000580073 CMSS1Q9BQ75 279 aaKnown RBP10.49□□□□□ -0.73
TRAF4-214ENST00000580073 BCL7BQ9BQE9 202 aa10.49□□□□□ -0.73
TRAF4-214ENST00000580073 Q9N2K0 584 aa10.49□□□□□ -0.73
TRAF4-214ENST00000580073 GFOD1Q9NXC2 390 aa10.49□□□□□ -0.73
TRAF4-214ENST00000580073 COMMD3Q9UBI1 195 aa10.49□□□□□ -0.73
TRAF4-214ENST00000580073 ZNF230Q9UIE0 474 aaPredicted RBP10.49□□□□□ -0.73
TRAF4-214ENST00000580073 NBEAL2Q6ZNJ1 2754 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 SORL1Q92673 2214 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 TRAV18A0A075B6X5 111 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 IGKV1-6A0A0C4DH72 117 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 TMEM235A6NFC5 223 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 SLC31A2O15432 143 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 SPINT2O43291 252 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 HPGDSO60760 199 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 TMEM127O75204 238 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 IGHG4P01861 327 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 SCTP09683 121 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 ZNF182P17025 639 aaPredicted RBP10.48□□□□□ -0.73
TRAF4-214ENST00000580073 ELK1P19419 428 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 REG1BP48304 166 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 LUMP51884 338 aaPredicted RBP10.48□□□□□ -0.73
TRAF4-214ENST00000580073 ZNF134P52741 427 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 DIAPH2-AS1Q14236 149 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 PRR18Q8N4B5 295 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 NUDCD2Q8WVJ2 157 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 KCTD12Q96CX2 325 aaKnown RBP10.48□□□□□ -0.73
TRAF4-214ENST00000580073 DUX3Q96PT4 197 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 S1PR3Q99500 378 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 MIXL1Q9H2W2 232 aa10.48□□□□□ -0.73
TRAF4-214ENST00000580073 ZNF256Q9Y2P7 627 aaPredicted RBP10.48□□□□□ -0.73
TRAF4-214ENST00000580073 LSM4Q9Y4Z0 139 aaKnown RBP10.48□□□□□ -0.73
TRAF4-214ENST00000580073 TENM3Q9P273 2699 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 IGHV3-72A0A0B4J1Y9 119 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 DPPA5A6NC42 116 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 CTDSP2O14595 271 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 FCGR3AP08637 254 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 ZNF137PP52743 207 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 FHL3Q13643 280 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 DEFB136Q30KP8 78 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 UBE2NLQ5JXB2 153 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 HACD4Q5VWC8 232 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 TMEM65Q6PI78 240 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 ZNF439Q8NDP4 499 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 OR10V1Q8NGI7 309 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 SETD6Q8TBK2 473 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 PRR25Q96S07 402 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 SLIRPQ9GZT3 109 aaKnown RBP10.47□□□□□ -0.73
TRAF4-214ENST00000580073 PARP12Q9H0J9 701 aaKnown RBP10.47□□□□□ -0.73
TRAF4-214ENST00000580073 AUNIPQ9H7T9 357 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 CHMP1AQ9HD42 196 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-214ENST00000580073 C12orf4Q9NQ89 552 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 GNG12Q9UBI6 72 aa10.47□□□□□ -0.73
TRAF4-214ENST00000580073 ZNF107Q9UII5 783 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-214ENST00000580073 LY86O95711 162 aa10.46□□□□□ -0.73
TRAF4-214ENST00000580073 HLA-DQB1P01920 261 aa10.46□□□□□ -0.73
TRAF4-214ENST00000580073 IGF1P05019 195 aa10.46□□□□□ -0.73
TRAF4-214ENST00000580073 CD3GP09693 182 aa10.46□□□□□ -0.73
TRAF4-214ENST00000580073 SLC25A48Q6ZT89 311 aaKnown RBP10.46□□□□□ -0.73
TRAF4-214ENST00000580073 FAM71E2Q8N5Q1 922 aa10.46□□□□□ -0.73
TRAF4-214ENST00000580073 RBMXL1Q96E39 390 aaKnown RBP10.46□□□□□ -0.73
TRAF4-214ENST00000580073 RIMS4Q9H426 269 aaPredicted RBP10.46□□□□□ -0.73
TRAF4-214ENST00000580073 OR1A1Q9P1Q5 309 aa10.46□□□□□ -0.73
TRAF4-214ENST00000580073 SMAD5-AS1Q9Y6J3 95 aa10.46□□□□□ -0.73
TRAF4-214ENST00000580073 RYR3Q15413 4870 aa10.46□□□□□ -0.74
TRAF4-214ENST00000580073 XRCC3O43542 346 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 GSTP1P09211 210 aaKnown RBP10.45□□□□□ -0.74
TRAF4-214ENST00000580073 GSTT2P0CG29 244 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 GSTT2BP0CG30 244 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 PSMB8P28062 276 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 PPP1CCP36873 323 aaKnown RBP10.45□□□□□ -0.74
TRAF4-214ENST00000580073 TAS2R20P59543 309 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 HLA-DRB3P79483 266 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 CFHR3Q02985 330 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 ZNF616Q08AN1 781 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 ARFRP1Q13795 201 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 MMDQ15546 238 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 MORN2Q502X0 79 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 CT45A1Q5HYN5 189 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 STEAP3Q658P3 488 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 ZNF554Q86TJ5 538 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 ZNF429Q86V71 674 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 GVQW1Q8N7I0 195 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 OR11H1Q8NG94 326 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 CT45A3Q8NHU0 189 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 ACOT12Q8WYK0 555 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 ST6GALNAC6Q969X2 333 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 UBE2E2Q96LR5 201 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 KCNIP1Q9NZI2 227 aa10.45□□□□□ -0.74
TRAF4-214ENST00000580073 CCDC59Q9P031 241 aaKnown RBP10.45□□□□□ -0.74
TRAF4-214ENST00000580073 RSL24D1Q9UHA3 163 aaKnown RBP10.45□□□□□ -0.74
TRAF4-214ENST00000580073 A0A0A6YYH2 397 aa10.44□□□□□ -0.74
TRAF4-214ENST00000580073 CCDC160A6NGH7 325 aa10.44□□□□□ -0.74
TRAF4-214ENST00000580073 A6NJ64 397 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms