RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 ZNF816Q0VGE8 651 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-212ENST00000580061 C16orf87Q6PH81 154 aa12.85□□□□□ -0.35
CSNK1D-212ENST00000580061 DRAM1Q8N682 238 aa12.85□□□□□ -0.35
CSNK1D-212ENST00000580061 RTN4IP1Q8WWV3 396 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-212ENST00000580061 RPEQ96AT9 228 aa12.85□□□□□ -0.35
CSNK1D-212ENST00000580061 C5orf30Q96GV9 206 aa12.85□□□□□ -0.35
CSNK1D-212ENST00000580061 S1PR3Q99500 378 aa12.85□□□□□ -0.35
CSNK1D-212ENST00000580061 MEGF9Q9H1U4 602 aa12.85□□□□□ -0.35
CSNK1D-212ENST00000580061 GAPDHP04406 335 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-212ENST00000580061 FBP1P09467 338 aa12.84□□□□□ -0.35
CSNK1D-212ENST00000580061 ECI1P42126 302 aa12.84□□□□□ -0.35
CSNK1D-212ENST00000580061 REG1BP48304 166 aa12.84□□□□□ -0.35
CSNK1D-212ENST00000580061 ASAH1Q13510 395 aa12.84□□□□□ -0.35
CSNK1D-212ENST00000580061 MSMO1Q15800 293 aa12.84□□□□□ -0.35
CSNK1D-212ENST00000580061 TUSC1Q2TAM9 212 aa12.84□□□□□ -0.35
CSNK1D-212ENST00000580061 DEFB112Q30KQ8 113 aa12.84□□□□□ -0.35
CSNK1D-212ENST00000580061 LPCAT3Q6P1A2 487 aa12.84□□□□□ -0.35
CSNK1D-212ENST00000580061 TGIF2LXQ8IUE1 241 aa12.84□□□□□ -0.35
CSNK1D-212ENST00000580061 AKR1E2Q96JD6 320 aa12.84□□□□□ -0.35
CSNK1D-212ENST00000580061 RSRP1Q9BUV0 290 aa12.84□□□□□ -0.35
CSNK1D-212ENST00000580061 FAM96BQ9Y3D0 163 aa12.84□□□□□ -0.35
CSNK1D-212ENST00000580061 MDFIC2A0A1B0GVS7 189 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 A0A1W2PPI3 338 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 TXNL1O43396 289 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 SRD5A1P18405 259 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 CCR6P51684 374 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 BAMBIQ13145 260 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 CCDC144NLQ6NUI1 221 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 ZNF818PQ6ZRF7 136 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 SLC38A6Q8IZM9 456 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 OR8H3Q8N146 312 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 ZBTB34Q8NCN2 500 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 BVESQ8NE79 360 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 MARCH1Q8TCQ1 289 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 ZNF48Q96MX3 618 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 PALMDQ9NP74 551 aa12.83□□□□□ -0.36
CSNK1D-212ENST00000580061 IGHV1-3A0A0C4DH29 117 aa12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 M0R1X1 148 aa12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 CRLF1O75462 422 aa12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 CT45A6P0DMU7 189 aa12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 CT45A5P0DMU8 189 aa12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 CT45A7P0DMV0 189 aa12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 PGAM2P15259 253 aa12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 SCGB2A2Q13296 93 aa12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 EIF4EBP1Q13541 118 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 SURF2Q15527 256 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 NABP2Q9BQ15 211 aa12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 SLC25A21Q9BQT8 299 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 MRPL20Q9BYC9 149 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 PRDM13Q9H4Q3 707 aa12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 GPR132Q9UNW8 380 aa12.82□□□□□ -0.36
CSNK1D-212ENST00000580061 GPR31O00270 319 aa12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 DUTP33316 252 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 LINC00205P59089 165 aa12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 DEFA1P59665 94 aa12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 DEFA3P59666 94 aa12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 HABP2Q14520 560 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 RBMS2Q15434 407 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 PLA1AQ53H76 456 aa12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 MZT2BQ6NZ67 158 aa12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 DRAXINQ8NBI3 349 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 ZFAND1Q8TCF1 268 aa12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 CFHR4Q92496 578 aa12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 ZNF486Q96H40 463 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 VSIG4Q9Y279 399 aa12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 FN1P02751 2386 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-212ENST00000580061 VGLL3A8MV65 326 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 TIMM23O14925 209 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 TNFSF12O43508 249 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 NDUFB6O95139 128 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 CTSDP07339 412 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 PI3P19957 117 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 SLC6A1P30531 599 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 THBS3P49746 956 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 ARHGDIBP52566 201 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 DCTN2Q13561 401 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 PHLDA2Q53GA4 152 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 ZNF66Q6ZN08 573 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 MOB3BQ86TA1 216 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 CMTM1Q8IZ96 169 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 ZDHHC22Q8N966 263 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 POC5Q8NA72 575 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 SCGB3A2Q96PL1 93 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 GPHA2Q96T91 129 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 HSD17B10Q99714 261 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 RTBDNQ9BSG5 229 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 C5orf66Q9H5L9 145 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 SLC2A9Q9NRM0 540 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 CUBNO60494 3623 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 MTORP42345 2549 aa12.8□□□□□ -0.36
CSNK1D-212ENST00000580061 LINC00473A8K010 186 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 PGLYRP1O75594 196 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 FAM157CP0CG43 387 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 DYNLT3P51808 116 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 RND3P61587 244 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 RPL30P62888 115 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 AANATQ16613 207 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 LRRC75BQ2VPJ9 315 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 Q6YL49 198 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 GLDNQ6ZMI3 551 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms