RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329		A0A1W2PN81	502 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CGB1	A6NKQ9	187 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SNTN	A6NMZ2	147 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	LINC00473	A8K010	186 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329		E7EUB6	86 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RAB27B	O00194	218 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ITGB1BP1	O14713	200 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	OVOL1	O14753	267 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MAGEB3	O15480	346 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SPINT2	O43291	252 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TXNL1	O43396	289 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CSN3	P07498	182 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	LGALS1	P09382	135 aa	Known RBP	3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	GP9	P14770	177 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SRM	P19623	302 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CHRNA7	P36544	502 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MAP2K4	P45985	399 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ARHGDIB	P52566	201 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	OR10A3	P58181	314 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	FABP5	Q01469	135 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	EIF4EBP1	Q13541	118 aa	Predicted RBP	3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TPBG	Q13641	420 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	KLF5	Q13887	457 aa	Predicted RBP	3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RCN1	Q15293	331 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ECSCR	Q19T08	205 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TMEM30B	Q3MIR4	351 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	IGSF11	Q5DX21	431 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	C6orf183	Q5T699	404 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ZNF660	Q6AZW8	331 aa	Predicted RBP	3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	LIN54	Q6MZP7	749 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	FAM71F2	Q6NXP2	309 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	DHRSX	Q8N5I4	330 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	PACRGL	Q8N7B6	248 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	LFNG	Q8NES3	379 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	BPIFB6	Q8NFQ5	453 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MUC7	Q8TAX7	377 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	NEK7	Q8TDX7	302 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MAFIP	Q8WZ33	124 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	PHYHIP	Q92561	330 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TMEM203	Q969S6	136 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ARHGAP5-AS1	Q96IT6	56 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MS4A10	Q96PG2	267 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TMED9	Q9BVK6	235 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	PECR	Q9BY49	303 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SPACA1	Q9HBV2	294 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RETN	Q9HD89	108 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	FOXA2	Q9Y261	457 aa	Predicted RBP	3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	AK6	Q9Y3D8	172 aa	Known RBP	3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ORC6	Q9Y5N6	252 aa		3.38	□□□□□ -1.87
PPP4R1-209	ENST00000578329	FRAS1	Q86XX4	4008 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TMEM272	A0A1B0GTI8	110 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ZNF785	A8K8V0	405 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329		A8MZ25	164 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	LINC01619	G3V211	115 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	C3orf84	H3BNL1	204 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MFNG	O00587	321 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SLC17A2	O00624	439 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SLC25A17	O43808	307 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	BRI3	O95415	125 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CA2	P00918	260 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	OR8U8	P0C7N1	319 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	GSTT2	P0CG29	244 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	GSTT2B	P0CG30	244 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	IGHV4-30-4	P0DP06	118 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MYOD1	P15172	320 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MYL12A	P19105	171 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	VDAC1	P21796	283 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	IL3RA	P26951	378 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	AQP4	P55087	323 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RPL30	P62888	115 aa	Known RBP	3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	HLA-DRB3	P79483	266 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	EWSR1	Q01844	656 aa	Known RBP eCLIP	3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	GABPB1	Q06547	395 aa	Predicted RBP	3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	GPR176	Q14439	515 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SPHAR	Q15513	63 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	AKIRIN2	Q53H80	203 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	C10orf55	Q5SWW7	151 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	LIPK	Q5VXJ0	399 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TTC23	Q5W5X9	447 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ZNF773	Q6PK81	442 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ZNF562	Q6V9R5	426 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CEACAM19	Q7Z692	300 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	PPP1R27	Q86WC6	154 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	NKAIN3	Q8N8D7	197 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ADAD2	Q8NCV1	583 aa	Known RBP	3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	OR5T1	Q8NG75	326 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	IL1F10	Q8WWZ1	152 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	GALM	Q96C23	342 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CPNE2	Q96FN4	548 aa	Predicted RBP	3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MRPL48	Q96GC5	212 aa	Known RBP	3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CITED4	Q96RK1	184 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CLCC1	Q96S66	551 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CHCHD6	Q9BRQ6	235 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CABLES2	Q9BTV7	478 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TMEM59	Q9BXS4	323 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	GPR61	Q9BZJ8	451 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	WFDC10A	Q9H1F0	79 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SDHAF2	Q9NX18	166 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RDH8	Q9NYR8	311 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	GHRL	Q9UBU3	117 aa		3.37	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms