RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 J3QT63 122 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 COX5BP10606 129 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 IL2RGP31785 369 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 CEACAM6P40199 344 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 CCL11P51671 97 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 FGF8P55075 233 aaPredicted RBP4.52□□□□□ -1.69
VAPA-203ENST00000577539 RND3P61587 244 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 RAB11AP62491 216 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 TGFBR3Q03167 851 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 TLE4Q04727 773 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 GTF3C1Q12789 2109 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 C9orf152Q5JTZ5 239 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 MED12LQ86YW9 2145 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 SAXO1Q8IYX7 474 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 PSENENQ9NZ42 101 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 KCNIP1Q9NZI2 227 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 TINAGQ9UJW2 476 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 WSB1Q9Y6I7 421 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 DOCK11Q5JSL3 2073 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 DFFBO76075 338 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 CLDN1O95832 211 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 OR2H2O95918 312 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 KRASP01116 189 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 HEXAP06865 529 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 RAB5AP20339 215 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 PMELP40967 661 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 MEOX2P50222 304 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 PPP1CBP62140 327 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 FABP9Q0Z7S8 132 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 OR8G1Q15617 311 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 NMSQ5H8A3 153 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 ZNF766Q5HY98 468 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 ZNF826PQ6ZT77 177 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 ZNF561Q8N587 486 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 CYB561D1Q8N8Q1 229 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 OR5D13Q8NGL4 314 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 PLPPR1Q8TBJ4 325 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 SLC25A40Q8TBP6 338 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 UNKLQ9H9P5 680 aaKnown RBP4.52□□□□□ -1.69
VAPA-203ENST00000577539 USF3Q68DE3 2245 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 A0A1W2PPE3 182 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 FAM157AC9JC47 383 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 H3BQ15 152 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 HMGB3O15347 200 aaKnown RBP4.51□□□□□ -1.69
VAPA-203ENST00000577539 SYNGR2O43760 224 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 AGFG2O95081 481 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 TFF1P04155 84 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 OR3A1P47881 315 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 FABP6P51161 128 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 HOXA4Q00056 320 aaPredicted RBP4.51□□□□□ -1.69
VAPA-203ENST00000577539 ZNF816Q0VGE8 651 aaPredicted RBP4.51□□□□□ -1.69
VAPA-203ENST00000577539 C1orf185Q5T7R7 199 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 PCSK4Q6UW60 755 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 RBMS3Q6XE24 437 aaKnown RBP4.51□□□□□ -1.69
VAPA-203ENST00000577539 ZNF429Q86V71 674 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 SCCPDHQ8NBX0 429 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 RFESDQ8TAC1 157 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 TRIB1Q96RU8 372 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 ATP5SQ99766 215 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 NIPSNAP3BQ9BS92 247 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 POLDIP2Q9Y2S7 368 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 SH2D1BO14796 132 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 SCAF4O95104 1147 aaKnown RBP4.51□□□□□ -1.69
VAPA-203ENST00000577539 IFNA4P05014 189 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 GABRA2P47869 451 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 IL24Q13007 206 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 RHEBQ15382 184 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 ZNF324BQ6AW86 544 aaPredicted RBP4.51□□□□□ -1.69
VAPA-203ENST00000577539 Q6ZRM9 215 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 TPRX1Q8N7U7 411 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 LYPD6BQ8NI32 183 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 BCL2L2Q92843 193 aaPredicted RBP4.51□□□□□ -1.69
VAPA-203ENST00000577539 RNF122Q9H9V4 155 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 TAAR3PQ9P1P4 343 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 IGHV3-43A0A0B4J1X8 118 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 PRSS44E7EML9 344 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 IFNL4K9M1U5 179 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 TOX4O94842 621 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 IFNA17P01571 189 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 HBE1P02100 147 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 IGHV3-43DP0DP04 118 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 TAS2R30P59541 319 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 BAXQ07812 192 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 KIAA0141Q14154 515 aaPredicted RBP4.51□□□□□ -1.69
VAPA-203ENST00000577539 H1FOOQ8IZA3 346 aaPredicted RBP4.51□□□□□ -1.69
VAPA-203ENST00000577539 TMEM178AQ8NBL3 297 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 RAB39BQ96DA2 213 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 RAB40CQ96S21 281 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 OR51I2Q9H344 312 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 ZNF665Q9H7R5 613 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 NIT2Q9NQR4 276 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 KIAA1456Q9P272 454 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 SPRR3Q9UBC9 169 aa4.51□□□□□ -1.69
VAPA-203ENST00000577539 A0A1B0GU03 582 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 UBE2L5PA0A1B0GUS4 154 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 DUXBA0A1W2PPF3 345 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 XKRY2A2RUG3 117 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 CEBPZOSA8MTT3 80 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 WNT9BO14905 357 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 TIMM8AO60220 97 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms