RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SP1P08047 785 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 KIAA1644Q3SXP7 199 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 OR1L4Q8NGR5 311 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 RNF2Q99496 336 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 A0A0A6YYD4 124 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 GNG10P50151 68 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 RSPO4Q2I0M5 234 aaPredicted RBP11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 LHFPL1Q86WI0 220 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 LRRC29Q8WV35 223 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 ZCCHC14Q8WYQ9 949 aaKnown RBP11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 SFRP2Q96HF1 295 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 RLFQ13129 1914 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 MGAMO43451 1857 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 SNRPCP09234 159 aaKnown RBP11.27□□□□□ -0.6
PCDHGB3-201ENST00000576222 TMEM11P17152 192 aa11.27□□□□□ -0.6
PCDHGB3-201ENST00000576222 CBLN1P23435 193 aa11.27□□□□□ -0.6
PCDHGB3-201ENST00000576222 NHLRC2Q8NBF2 726 aa11.27□□□□□ -0.6
PCDHGB3-201ENST00000576222 ZNF501Q96CX3 271 aaPredicted RBP11.27□□□□□ -0.6
PCDHGB3-201ENST00000576222 DECR2Q9NUI1 292 aa11.27□□□□□ -0.6
PCDHGB3-201ENST00000576222 ALKBH6Q3KRA9 238 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 VWA1Q6PCB0 445 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 FAM89BQ8N5H3 189 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 ZNF576Q9H609 170 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 ISLRO14498 428 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 SMPD2O60906 423 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 MST1LQ2TV78 715 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 LRRC75BQ2VPJ9 315 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 C18orf12Q96KH6 178 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 PHF7Q9BWX1 381 aaPredicted RBP11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 SYNGR1O43759 233 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 NEURL1O76050 574 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 OR1C1Q15619 314 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 TMEM170AQ8WVE7 144 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 WDYHV1Q96HA8 205 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 C14orf144Q96I85 54 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 DNAJC4Q9NNZ3 241 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 IL36RNQ9UBH0 155 aa11.27□□□□□ -0.61
PCDHGB3-201ENST00000576222 IGKV1-9A0A0C4DH69 117 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 AESQ08117 197 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 MIC13Q5XKP0 118 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 BPIFA4PQ86YQ2 179 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 SPEM1Q8N4L4 309 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 RBM14Q96PK6 669 aaKnown RBP11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 PLA2G3Q9NZ20 509 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 OR6C3Q9NZP0 311 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 TINAGQ9UJW2 476 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 HIST1H1EP10412 219 aaKnown RBP11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 GZMHP20718 246 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 PPOXP50336 477 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 ERVFRD-1P60508 538 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 RPL23P62829 140 aaKnown RBP11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 PDPNQ86YL7 162 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 DLL3Q9NYJ7 618 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 FZR1Q9UM11 496 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 IGKV1D-8A0A087WSZ0 117 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 IFITM10A6NMD0 228 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 C9JQL5 133 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 ZG16O60844 167 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 SRIP30626 198 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 MRPS11P82912 194 aaKnown RBP11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 ARL16Q0P5N6 197 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 MISP3Q96FF7 219 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 ADTRPQ96IZ2 230 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 IL36GQ9NZH8 169 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 LOXL2Q9Y4K0 774 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 TRBV24-1A0A075B6N3 115 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 C5orf67F2Z3F1 127 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 P2RY6Q15077 328 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 IBA57Q5T440 356 aaKnown RBP11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 PLSCR2Q9NRY7 297 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 WNT16Q9UBV4 365 aa11.26□□□□□ -0.61
PCDHGB3-201ENST00000576222 TSC2P49815 1807 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 MPDZO75970 2070 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 A6NDN8 102 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 P01737 135 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 AMBPP02760 352 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 ORM2P19652 201 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 MMD2Q8IY49 270 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 OPN3Q9H1Y3 402 aaPredicted RBP11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 CXXC4Q9H2H0 198 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 SAP30LQ9HAJ7 183 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 CCL11P51671 97 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 EGLN1Q9GZT9 426 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 R4GN57 208 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 ZNHIT1O43257 154 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 FAM87AP0C7U9 286 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 ARL14EPLP0DKL9 152 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 TNFSF10P50591 281 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 ARSJQ5FYB0 599 aaPredicted RBP11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 C10orf128Q5T292 105 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 OR2Y1Q8NGV0 311 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 MIEN1Q9BRT3 115 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 MED12Q93074 2177 aa11.25□□□□□ -0.61
PCDHGB3-201ENST00000576222 TRGV5A0A0B4J1U4 118 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 SPRY3O43610 288 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 VMA21Q3ZAQ7 101 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 C12orf54Q6X4T0 127 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 ATOH7Q8N100 152 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 OR52L2PQ8NGH6 319 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 HSPB8Q9UJY1 196 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms