RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 J3QL48 77 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 SSX5O60225 188 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 OR2F2O95006 317 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 GAPDHP04406 335 aaKnown RBP10.6□□□□□ -0.71
RPAIN-216ENST00000575599 FCGR3AP08637 254 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 VSIG10L2P0DP72 767 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 FAUP35544 74 aaKnown RBP10.6□□□□□ -0.71
RPAIN-216ENST00000575599 ZNF134P52741 427 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 TAS2R19P59542 299 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 ZNF816Q0VGE8 651 aaPredicted RBP10.6□□□□□ -0.71
RPAIN-216ENST00000575599 Q3ZCU0 254 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 MORN2Q502X0 79 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 CT45A1Q5HYN5 189 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 Q6ZS46 218 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 SLC25A48Q6ZT89 311 aaKnown RBP10.6□□□□□ -0.71
RPAIN-216ENST00000575599 C16orf82Q7Z2V1 217 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 LYG1Q8N1E2 194 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 KLHDC1Q8N7A1 406 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 BEST4Q8NFU0 473 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 CT45A3Q8NHU0 189 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 CFHR4Q92496 578 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 RBM14Q96PK6 669 aaKnown RBP10.6□□□□□ -0.71
RPAIN-216ENST00000575599 ABHD14AQ9BUJ0 271 aa10.6□□□□□ -0.71
RPAIN-216ENST00000575599 IGHV3-72A0A0B4J1Y9 119 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 IGHV1-3A0A0C4DH29 117 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 SH2D7A6NKC9 451 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-216ENST00000575599 ZNF736B4DX44 427 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-216ENST00000575599 PEX14O75381 377 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 IGKV1D-33P01593 117 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 IGKV1-33P01594 117 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 TMEM11P17152 192 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 OR3A3P47888 321 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 ARPC4P59998 168 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 HTD2P86397 168 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 HNF4GQ14541 408 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 KIR2DS1Q14954 304 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 TMEM95Q3KNT9 176 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 ZNF880Q6PDB4 577 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 C11orf88Q6PI97 169 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 HOGA1Q86XE5 327 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 Q8N2B8 174 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 GVQW1Q8N7I0 195 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 C11orf44Q8N8P7 122 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 TMEM229BQ8NBD8 167 aa10.59□□□□□ -0.71
RPAIN-216ENST00000575599 RTN4IP1Q8WWV3 396 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-216ENST00000575599 ZNF230Q9UIE0 474 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-216ENST00000575599 ZNF107Q9UII5 783 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-216ENST00000575599 TRBV6-6A0A0A6YYG2 114 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 FAM90A9PA6NNJ1 464 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 LANCL1O43813 399 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 RGS11O94810 467 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 IFNA6P05013 189 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 AKAIN1P0CW23 69 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 HLA-DMAP28067 261 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 VDAC2P45880 294 aaPredicted RBP10.58□□□□□ -0.72
RPAIN-216ENST00000575599 TAS2R46P59540 309 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 HLA-DRB3P79483 266 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 ABCA11PQ4W5N1 156 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 ACTBL2Q562R1 376 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 C9orf152Q5JTZ5 239 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 XP32Q5T750 250 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 STEAP3Q658P3 488 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 HIST2H2BDQ6DRA6 164 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 MZT2BQ6NZ67 158 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 TGIF2LXQ8IUE1 241 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 LYSMD2Q8IV50 215 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 POC5Q8NA72 575 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 OR2AK2Q8NG84 335 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 OR5H2Q8NGV7 314 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 MAFIPQ8WZ33 124 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 TRIM63Q969Q1 353 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 Q9N2K0 584 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 SERTAD4Q9NUC0 356 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 RBMX2Q9Y388 322 aaKnown RBP10.58□□□□□ -0.72
RPAIN-216ENST00000575599 MOB4Q9Y3A3 225 aa10.58□□□□□ -0.72
RPAIN-216ENST00000575599 ANKRD20A5PA0PJZ0 165 aa10.57□□□□□ -0.72
RPAIN-216ENST00000575599 YPEL1O60688 119 aa10.57□□□□□ -0.72
RPAIN-216ENST00000575599 RAB3DO95716 219 aa10.57□□□□□ -0.72
RPAIN-216ENST00000575599 HERPUD1Q15011 391 aa10.57□□□□□ -0.72
RPAIN-216ENST00000575599 SRSF7Q16629 238 aaKnown RBP eCLIP10.57□□□□□ -0.72
RPAIN-216ENST00000575599 RNASE10Q5GAN6 216 aaKnown RBP10.57□□□□□ -0.72
RPAIN-216ENST00000575599 PRR31Q5SQ13 230 aa10.57□□□□□ -0.72
RPAIN-216ENST00000575599 STEAP1BQ6NZ63 245 aa10.57□□□□□ -0.72
RPAIN-216ENST00000575599 THNSL2Q86YJ6 484 aa10.57□□□□□ -0.72
RPAIN-216ENST00000575599 DEDD2Q8WXF8 326 aa10.57□□□□□ -0.72
RPAIN-216ENST00000575599 ST6GALNAC6Q969X2 333 aa10.57□□□□□ -0.72
RPAIN-216ENST00000575599 YPEL2Q96QA6 119 aa10.57□□□□□ -0.72
RPAIN-216ENST00000575599 C7orf50Q9BRJ6 194 aaKnown RBP10.57□□□□□ -0.72
RPAIN-216ENST00000575599 MCUBQ9NWR8 336 aa10.57□□□□□ -0.72
RPAIN-216ENST00000575599 SLC23A1Q9UHI7 598 aa10.57□□□□□ -0.72
RPAIN-216ENST00000575599 NAP1L6A6NFF2 107 aa10.56□□□□□ -0.72
RPAIN-216ENST00000575599 TRDCB7Z8K6 153 aa10.56□□□□□ -0.72
RPAIN-216ENST00000575599 DISC1C4P0D8 188 aa10.56□□□□□ -0.72
RPAIN-216ENST00000575599 M0QZK8 103 aa10.56□□□□□ -0.72
RPAIN-216ENST00000575599 HSPA12AO43301 675 aa10.56□□□□□ -0.72
RPAIN-216ENST00000575599 TXNL1O43396 289 aa10.56□□□□□ -0.72
RPAIN-216ENST00000575599 PMP2P02689 132 aa10.56□□□□□ -0.72
RPAIN-216ENST00000575599 CD3DP04234 171 aa10.56□□□□□ -0.72
RPAIN-216ENST00000575599 SCTP09683 121 aa10.56□□□□□ -0.72
RPAIN-216ENST00000575599 TBPP20226 339 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms