RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 FAM222BQ8WU58 562 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 HSD17B10Q99714 261 aaKnown RBP11.68□□□□□ -0.54
VPS33B-208ENST00000574755 ATP5SQ99766 215 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 C19orf12Q9NSK7 152 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 COA4Q9NYJ1 87 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 PSENENQ9NZ42 101 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 OR6C3Q9NZP0 311 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 LINC00473A8K010 186 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 RNASEK-C17orf49H0YIS7 233 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 OR4A8P0C604 315 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 IRF2P14316 349 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 GPR12P47775 334 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 BRWD1-AS2P59051 145 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 CCL8P80075 99 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 ADIPOQQ15848 244 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 CR1LQ2VPA4 569 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 ADAM5Q6NVV9 412 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 SVBPQ8N300 66 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 C14orf79Q96F83 325 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 NKX6-2Q9C056 277 aaPredicted RBP11.68□□□□□ -0.54
VPS33B-208ENST00000574755 KCNJ16Q9NPI9 418 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 RFNGQ9Y644 331 aa11.68□□□□□ -0.54
VPS33B-208ENST00000574755 MED19A0JLT2 244 aaPredicted RBP11.67□□□□□ -0.54
VPS33B-208ENST00000574755 TSPAN4O14817 238 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 LINC00205P59089 165 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 STUMQ69YW2 141 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 TCTEX1D1Q8N7M0 179 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 FAM213BQ8TBF2 198 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 KALRNO60229 2985 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 FAM90A26D6RGX4 464 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 TRIM77I1YAP6 450 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 NUPL2O15504 423 aaKnown RBP11.67□□□□□ -0.54
VPS33B-208ENST00000574755 YPEL1O60688 119 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 DFFBO76075 338 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 IGHV3-7P01780 117 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 METTL15P1P0C7V9 234 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 UBE2KP61086 200 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 RUNX1Q01196 453 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 GUCA2BQ16661 112 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 DUX4L9Q6RFH8 374 aaPredicted RBP11.67□□□□□ -0.54
VPS33B-208ENST00000574755 SSX8Q7RTT4 187 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 Q8TCH9 128 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 GNPNAT1Q96EK6 184 aaPredicted RBP11.67□□□□□ -0.54
VPS33B-208ENST00000574755 SDSLQ96GA7 329 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 YPEL2Q96QA6 119 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 SEC11CQ9BY50 192 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 CALYQ9NYX4 217 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 RAXQ9Y2V3 346 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 TANC2Q9HCD6 1990 aa11.67□□□□□ -0.54
VPS33B-208ENST00000574755 DSCAML1Q8TD84 2053 aa11.66□□□□□ -0.54
VPS33B-208ENST00000574755 ATXN7O15265 892 aaPredicted RBP11.66□□□□□ -0.54
VPS33B-208ENST00000574755 CD5P06127 495 aa11.66□□□□□ -0.54
VPS33B-208ENST00000574755 TNFRSF1AP19438 455 aa11.66□□□□□ -0.54
VPS33B-208ENST00000574755 SNCAP37840 140 aa11.66□□□□□ -0.54
VPS33B-208ENST00000574755 DVL1P1P54792 670 aaPredicted RBP11.66□□□□□ -0.54
VPS33B-208ENST00000574755 UCNP55089 124 aa11.66□□□□□ -0.54
VPS33B-208ENST00000574755 LOXL3P58215 753 aa11.66□□□□□ -0.54
VPS33B-208ENST00000574755 TNFRSF9Q07011 255 aa11.66□□□□□ -0.54
VPS33B-208ENST00000574755 C10orf91Q5T1B1 145 aa11.66□□□□□ -0.54
VPS33B-208ENST00000574755 SLC25A24Q6NUK1 477 aa11.66□□□□□ -0.54
VPS33B-208ENST00000574755 TGIF2LYQ8IUE0 185 aa11.66□□□□□ -0.54
VPS33B-208ENST00000574755 LAMP3Q9UQV4 416 aa11.66□□□□□ -0.54
VPS33B-208ENST00000574755 CARHSP1Q9Y2V2 147 aaKnown RBP11.66□□□□□ -0.54
VPS33B-208ENST00000574755 TRGV8A0A0C4DH27 118 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 C17orf100A8MU93 164 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 UMAD1C9J7I0 102 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 F2RL2O00254 374 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 CLDN14O95500 239 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 GYPAP02724 150 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 SFTA3P0C7M3 94 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 SPANXN5Q5MJ07 72 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 PUSL1Q8N0Z8 303 aaKnown RBP11.65□□□□□ -0.54
VPS33B-208ENST00000574755 ZCCHC24Q8N2G6 241 aaKnown RBP11.65□□□□□ -0.54
VPS33B-208ENST00000574755 WFIKKN1Q96NZ8 548 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 VKORC1Q9BQB6 163 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 ZNF665Q9H7R5 613 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 IGF2RP11717 2491 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 IFNA5P01569 189 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 P0C879 139 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 TAS2R30P59541 319 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 H2BFWTQ7Z2G1 175 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 COMMD1Q8N668 190 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 GAFA1Q96PS6 74 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 DIRC2Q96SL1 478 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 CCL13Q99616 98 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.65□□□□□ -0.54
VPS33B-208ENST00000574755 DCAF16Q9NXF7 216 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 HSPB7Q9UBY9 170 aa11.65□□□□□ -0.54
VPS33B-208ENST00000574755 TRGV10A0A0A0MS01 117 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 A0A1B0GV50 99 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 LRRC30A6NM36 301 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 RBMXL2O75526 392 aaKnown RBP11.64□□□□□ -0.55
VPS33B-208ENST00000574755 DUTP33316 252 aaKnown RBP11.64□□□□□ -0.55
VPS33B-208ENST00000574755 ZNF134P52741 427 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 HBG1P69891 147 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 HBG2P69892 147 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 NCR3LG1Q68D85 454 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 FAM216BQ8N7L0 139 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 CD300LFQ8TDQ1 290 aa11.64□□□□□ -0.55
VPS33B-208ENST00000574755 FAM216AQ8WUB2 273 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms