RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 YLPM1P49750 1951 aaKnown RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 RPRD2Q5VT52 1461 aaKnown RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 BAZ1BQ9UIG0 1483 aaKnown RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 AGRNO00468 2067 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 ITGB4P16144 1822 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 IGLV3-16A0A075B6K0 115 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 IGHV3OR15-7A0A075B7D8 119 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 IGHV1-69-2A0A0G2JMI3 117 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 GOLGA6L4A6NEF3 574 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 OR4C45A6NMZ5 311 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 A8MWP4 228 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 INMT-MINDY4F8WBC2 141 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 BHLHE40O14503 412 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 OR7C1O76099 320 aaPredicted RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 APOMO95445 188 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 FSTL3O95633 263 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 IGKV1D-33P01593 117 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 IGKV1-33P01594 117 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 TTRP02766 147 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 TRGV3P03979 118 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 HLA-DQB2P05538 268 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 CD5P06127 495 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 GUSBP08236 651 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 RPSAP08865 295 aaKnown RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 CD7P09564 240 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 CGB3P0DN86 165 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 CGB7P0DN87 165 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 ZNF32P17041 273 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 HIST1H1TP22492 207 aaPredicted RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 ATP6V0CP27449 155 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 CD34P28906 385 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 OR10J1P30954 320 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 OPRM1P35372 400 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 PPP1CCP36873 323 aaKnown RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 TGFBR2P37173 567 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 TAF6P49848 677 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 DAPP51397 102 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 POLR2GP62487 172 aaKnown RBP eCLIP1.32□□□□□ -2.2
CHD3-217ENST00000574022 PSG4Q00888 419 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 RUNX1Q01196 453 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 BSPH1Q075Z2 132 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 ZNF616Q08AN1 781 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 FABP9Q0Z7S8 132 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 APOFQ13790 326 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 PDGFRLQ15198 375 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 PLPPR5Q32ZL2 321 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 TRIQKQ629K1 86 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 FAM71E1Q6IPT2 247 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 LPCAT3Q6P1A2 487 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 SLC25A34Q6PIV7 304 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 UNQ9165/PRO28630Q6UXU0 137 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 SLC36A1Q7Z2H8 476 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 SMIM15Q7Z3B0 74 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 GLT6D1Q7Z4J2 308 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 DAZ4Q86SG3 579 aaKnown RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 LRP11Q86VZ4 500 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 C20orf196Q8IYI0 205 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 C1orf174Q8IYL3 243 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 SLC35F6Q8N357 371 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 ZNF676Q8N7Q3 588 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 ZNF680Q8NEM1 530 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 OR51A2Q8NGJ7 313 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 OR2T4Q8NH00 348 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 MCFD2Q8NI22 146 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 RTN4IP1Q8WWV3 396 aaPredicted RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 RMI2Q96E14 147 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 PPP1R2P1Q96PQ5 205 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 TBX5Q99593 518 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 CCL13Q99616 98 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 HOPXQ9BPY8 73 aaPredicted RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 ULBP3Q9BZM4 244 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 OR2D2Q9H210 308 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 TRABDQ9H4I3 376 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 DAZ1Q9NQZ3 744 aaKnown RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 ARMC1Q9NVT9 282 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 ZNF586Q9NXT0 402 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 IDI2-AS1Q9NZ38 188 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 OPTCQ9UBM4 332 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 DHCR7Q9UBM7 475 aaKnown RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 HHLA2Q9UM44 414 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 CELA1Q9UNI1 258 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 COL27A1Q8IZC6 1860 aaPredicted RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 MTUS2Q5JR59 1369 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 DHX57Q6P158 1386 aaKnown RBP1.32□□□□□ -2.2
CHD3-217ENST00000574022 ANKRD30AQ9BXX3 1397 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 DCCP43146 1447 aa1.32□□□□□ -2.2
CHD3-217ENST00000574022 ZNF318Q5VUA4 2279 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 C7orf66A4D0T2 115 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 A6NED7 52 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 OR6C6A6NF89 314 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 FAM159BA6NKW6 160 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 ZNF729A6NN14 1252 aaPredicted RBP1.31□□□□□ -2.2
CHD3-217ENST00000574022 C2orf74A8MZ97 194 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 C15orf65H3BRN8 121 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 FAAHO00519 579 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 KLRC4O43908 158 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 PDE6DO43924 150 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 CIAO1O76071 339 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 IGHMP01871 453 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 IGLV7-43P04211 117 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms