RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SLC25A33Q9BSK2 321 aa8.83□□□□□ -1
CHD3-216ENST00000573936 PRSS22Q9GZN4 317 aa8.83□□□□□ -1
CHD3-216ENST00000573936 SCPEP1Q9HB40 452 aa8.83□□□□□ -1
CHD3-216ENST00000573936 AKIP1Q9NQ31 210 aa8.83□□□□□ -1
CHD3-216ENST00000573936 NECAP2Q9NVZ3 263 aa8.83□□□□□ -1
CHD3-216ENST00000573936 RABL2AQ9UBK7 228 aaPredicted RBP8.83□□□□□ -1
CHD3-216ENST00000573936 RABL2BQ9UNT1 228 aa8.83□□□□□ -1
CHD3-216ENST00000573936 MRPS7Q9Y2R9 242 aaKnown RBP8.83□□□□□ -1
CHD3-216ENST00000573936 V9GYH0 126 aa8.83□□□□□ -1
CHD3-216ENST00000573936 VWFP04275 2813 aa8.83□□□□□ -1
CHD3-216ENST00000573936 IGKV1D-8A0A087WSZ0 117 aa8.82□□□□□ -1
CHD3-216ENST00000573936 CHST1O43916 411 aa8.82□□□□□ -1
CHD3-216ENST00000573936 SLC22A5O76082 557 aa8.82□□□□□ -1
CHD3-216ENST00000573936 MOSP00540 346 aa8.82□□□□□ -1
CHD3-216ENST00000573936 PTHLHP12272 177 aa8.82□□□□□ -1
CHD3-216ENST00000573936 MDKP21741 143 aaPredicted RBP8.82□□□□□ -1
CHD3-216ENST00000573936 ETV6P41212 452 aa8.82□□□□□ -1
CHD3-216ENST00000573936 MFSD4AQ8N468 514 aa8.82□□□□□ -1
CHD3-216ENST00000573936 GVQW1Q8N7I0 195 aa8.82□□□□□ -1
CHD3-216ENST00000573936 OR5AP2Q8NGF4 316 aa8.82□□□□□ -1
CHD3-216ENST00000573936 OR2T6Q8NHC8 308 aa8.82□□□□□ -1
CHD3-216ENST00000573936 ABHD14BQ96IU4 210 aa8.82□□□□□ -1
CHD3-216ENST00000573936 NABP2Q9BQ15 211 aa8.82□□□□□ -1
CHD3-216ENST00000573936 PARP12Q9H0J9 701 aaKnown RBP8.82□□□□□ -1
CHD3-216ENST00000573936 MOB4Q9Y3A3 225 aa8.82□□□□□ -1
CHD3-216ENST00000573936 RNF114Q9Y508 228 aa8.82□□□□□ -1
CHD3-216ENST00000573936 NOTCH1P46531 2555 aa8.82□□□□□ -1
CHD3-216ENST00000573936 PRKDCP78527 4128 aaKnown RBP8.82□□□□□ -1
CHD3-216ENST00000573936 IGHV3-72A0A0B4J1Y9 119 aa8.81□□□□□ -1
CHD3-216ENST00000573936 FABP12A6NFH5 140 aa8.81□□□□□ -1
CHD3-216ENST00000573936 FGF16O43320 207 aa8.81□□□□□ -1
CHD3-216ENST00000573936 OR8U9P0C7N5 309 aa8.81□□□□□ -1
CHD3-216ENST00000573936 NAT1P18440 290 aa8.81□□□□□ -1
CHD3-216ENST00000573936 MC5RP33032 325 aa8.81□□□□□ -1
CHD3-216ENST00000573936 OR3A3P47888 321 aa8.81□□□□□ -1
CHD3-216ENST00000573936 LUMP51884 338 aaPredicted RBP8.81□□□□□ -1
CHD3-216ENST00000573936 TAS2R46P59540 309 aa8.81□□□□□ -1
CHD3-216ENST00000573936 LSAMPQ13449 338 aa8.81□□□□□ -1
CHD3-216ENST00000573936 CDK10Q15131 360 aa8.81□□□□□ -1
CHD3-216ENST00000573936 ZNF79Q15937 498 aa8.81□□□□□ -1
CHD3-216ENST00000573936 ARSJQ5FYB0 599 aaPredicted RBP8.81□□□□□ -1
CHD3-216ENST00000573936 SPANXN2Q5MJ10 180 aa8.81□□□□□ -1
CHD3-216ENST00000573936 FAM131AQ6UXB0 335 aa8.81□□□□□ -1
CHD3-216ENST00000573936 SNX29P2Q8IUI4 249 aa8.81□□□□□ -1
CHD3-216ENST00000573936 Q8N2B8 174 aa8.81□□□□□ -1
CHD3-216ENST00000573936 OR8H1Q8NGG4 311 aa8.81□□□□□ -1
CHD3-216ENST00000573936 OR8U1Q8NH10 309 aa8.81□□□□□ -1
CHD3-216ENST00000573936 LINC01006Q8NI28 216 aa8.81□□□□□ -1
CHD3-216ENST00000573936 GPX8Q8TED1 209 aa8.81□□□□□ -1
CHD3-216ENST00000573936 EAF1Q96JC9 268 aaPredicted RBP8.81□□□□□ -1
CHD3-216ENST00000573936 ABHD1Q96SE0 405 aa8.81□□□□□ -1
CHD3-216ENST00000573936 ZNF251Q9BRH9 671 aa8.81□□□□□ -1
CHD3-216ENST00000573936 ZNF747Q9BV97 191 aa8.81□□□□□ -1
CHD3-216ENST00000573936 MRPL20Q9BYC9 149 aaKnown RBP8.81□□□□□ -1
CHD3-216ENST00000573936 OR2D2Q9H210 308 aa8.81□□□□□ -1
CHD3-216ENST00000573936 RNF150Q9ULK6 438 aa8.81□□□□□ -1
CHD3-216ENST00000573936 ANAPC10Q9UM13 185 aa8.81□□□□□ -1
CHD3-216ENST00000573936 OR2W1Q9Y3N9 320 aa8.81□□□□□ -1
CHD3-216ENST00000573936 MEIS3P1A6NDR6 274 aa8.8□□□□□ -1
CHD3-216ENST00000573936 OR5H14A6NHG9 310 aa8.8□□□□□ -1
CHD3-216ENST00000573936 OR5H8P0DN80 308 aa8.8□□□□□ -1
CHD3-216ENST00000573936 NFYAP23511 347 aaPredicted RBP8.8□□□□□ -1
CHD3-216ENST00000573936 RCVRNP35243 200 aa8.8□□□□□ -1
CHD3-216ENST00000573936 MRPS10P82664 201 aaKnown RBP8.8□□□□□ -1
CHD3-216ENST00000573936 TAGLNQ01995 201 aaKnown RBP8.8□□□□□ -1
CHD3-216ENST00000573936 IL18Q14116 193 aa8.8□□□□□ -1
CHD3-216ENST00000573936 HNF4GQ14541 408 aa8.8□□□□□ -1
CHD3-216ENST00000573936 RPL39P5Q59GN2 51 aa8.8□□□□□ -1
CHD3-216ENST00000573936 PYHIN1Q6K0P9 492 aa8.8□□□□□ -1
CHD3-216ENST00000573936 TREML4Q6UXN2 200 aa8.8□□□□□ -1
CHD3-216ENST00000573936 GIMAP1Q8WWP7 306 aa8.8□□□□□ -1
CHD3-216ENST00000573936 TAF15Q92804 592 aaKnown RBP eCLIP8.8□□□□□ -1
CHD3-216ENST00000573936 NCBP2LA6PVI3 153 aaKnown RBP8.79□□□□□ -1
CHD3-216ENST00000573936 M0R1X1 148 aa8.79□□□□□ -1
CHD3-216ENST00000573936 RBBP9O75884 186 aa8.79□□□□□ -1
CHD3-216ENST00000573936 TUSC2O75896 110 aa8.79□□□□□ -1
CHD3-216ENST00000573936 APOA2P02652 100 aa8.79□□□□□ -1
CHD3-216ENST00000573936 CT45A6P0DMU7 189 aa8.79□□□□□ -1
CHD3-216ENST00000573936 CT45A5P0DMU8 189 aa8.79□□□□□ -1
CHD3-216ENST00000573936 CT45A7P0DMV0 189 aa8.79□□□□□ -1
CHD3-216ENST00000573936 PTBP1P26599 531 aaKnown RBP eCLIP8.79□□□□□ -11e-13■■■■■ 31.4
CHD3-216ENST00000573936 FCGR2CP31995 323 aa8.79□□□□□ -1
CHD3-216ENST00000573936 ACTBP60709 375 aa8.79□□□□□ -1
CHD3-216ENST00000573936 BLCAPP62952 87 aa8.79□□□□□ -1
CHD3-216ENST00000573936 ZNF45Q02386 682 aa8.79□□□□□ -1
CHD3-216ENST00000573936 CBX3Q13185 183 aa8.79□□□□□ -1
CHD3-216ENST00000573936 Q8N6K4 173 aa8.79□□□□□ -1
CHD3-216ENST00000573936 ZNF645Q8N7E2 425 aa8.79□□□□□ -1
CHD3-216ENST00000573936 OR5AN1Q8NGI8 311 aa8.79□□□□□ -1
CHD3-216ENST00000573936 OR5H2Q8NGV7 314 aa8.79□□□□□ -1
CHD3-216ENST00000573936 FCAMRQ8WWV6 532 aa8.79□□□□□ -1
CHD3-216ENST00000573936 S100ZQ8WXG8 99 aa8.79□□□□□ -1
CHD3-216ENST00000573936 SNAPC3Q92966 411 aa8.79□□□□□ -1
CHD3-216ENST00000573936 ADTRPQ96IZ2 230 aa8.79□□□□□ -1
CHD3-216ENST00000573936 TSC22D3Q99576 134 aa8.79□□□□□ -1
CHD3-216ENST00000573936 RNF5Q99942 180 aa8.79□□□□□ -1
CHD3-216ENST00000573936 RASL11BQ9BPW5 248 aa8.79□□□□□ -1
CHD3-216ENST00000573936 SRRQ9GZT4 340 aa8.79□□□□□ -1
CHD3-216ENST00000573936 ZNF702PQ9H963 129 aa8.79□□□□□ -1
CHD3-216ENST00000573936 SDHAF2Q9NX18 166 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms