RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 A8MV72 311 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-209ENST00000573474 M0R1X1 148 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 GOSR2O14653 212 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 PROP1O75360 226 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 SERPINE2P07093 398 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 SAA2P0DJI9 122 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-209ENST00000573474 ZNF16P17020 682 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-209ENST00000573474 UCP1P25874 307 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 DVL1P1P54792 670 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-209ENST00000573474 CD83Q01151 205 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 RPL39P5Q59GN2 51 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 Q5PR19 223 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 OR10X1Q8NGY0 326 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 C1orf159Q96HA4 380 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 TMEM56Q96MV1 263 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 CLEC7AQ9BXN2 247 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 ZNF436Q9C0F3 470 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-209ENST00000573474 UNKLQ9H9P5 680 aaKnown RBP11.17□□□□□ -0.62
CCDC40-209ENST00000573474 RAB18Q9NP72 206 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 MMP26Q9NRE1 261 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 TMEM56-RWDD3S4R434 201 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 ABCA12Q86UK0 2595 aa11.17□□□□□ -0.62
CCDC40-209ENST00000573474 CDS2O95674 445 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 IL3RAP26951 378 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 DUTP33316 252 aaKnown RBP11.16□□□□□ -0.62
CCDC40-209ENST00000573474 RPL30P62888 115 aaKnown RBP11.16□□□□□ -0.62
CCDC40-209ENST00000573474 LOXL1Q08397 574 aaPredicted RBP11.16□□□□□ -0.62
CCDC40-209ENST00000573474 FAM71F2Q6NXP2 309 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 C1orf229Q6ZS94 237 aaPredicted RBP11.16□□□□□ -0.62
CCDC40-209ENST00000573474 ZNF695Q8IW36 515 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 SELENOHQ8IZQ5 122 aaKnown RBP11.16□□□□□ -0.62
CCDC40-209ENST00000573474 BEND2Q8NDZ0 799 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 OR5M8Q8NGP6 311 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 TCTEX1D2Q8WW35 142 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 ASB13Q8WXK3 278 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 IL22RA2Q969J5 263 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 TMEM186Q96B77 213 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 ADTRPQ96IZ2 230 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 C18orf12Q96KH6 178 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 ZNF251Q9BRH9 671 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 SIRPDQ9H106 197 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 LPAR2Q9HBW0 351 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 RANGRFQ9HD47 186 aaPredicted RBP11.16□□□□□ -0.62
CCDC40-209ENST00000573474 FAM212BQ9NTI7 297 aaPredicted RBP11.16□□□□□ -0.62
CCDC40-209ENST00000573474 ZNRD1Q9P1U0 126 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 APCP25054 2843 aa11.16□□□□□ -0.62
CCDC40-209ENST00000573474 NAV2Q8IVL1 2488 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 ANKRD17O75179 2603 aaKnown RBP11.15□□□□□ -0.62
CCDC40-209ENST00000573474 POLQO75417 2590 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 A0A096LNT2 108 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 LINC00473A8K010 186 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 TOX4O94842 621 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 OR2A4O95047 310 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 SIX6O95475 246 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 IFNA21P01568 189 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 IGLV1-47P01700 117 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 HOXB5P09067 269 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 COX7A1P24310 79 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 THBS3P49746 956 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 ZNF137PP52743 207 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 CD300CQ08708 224 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 HLA-DRB5Q30154 266 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 TMEM268Q5VZI3 342 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 GSG1LQ6UXU4 331 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 ZNF833PQ6ZTB9 187 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 VMO1Q7Z5L0 202 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 TCTE3Q8IZS6 198 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 PNKDQ8N490 385 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 OR11H6Q8NGC7 330 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 LHFPL5Q8TAF8 219 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 CD300LFQ8TDQ1 290 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 OR2A7Q96R45 310 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 CHIAQ9BZP6 476 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 SIRT7Q9NRC8 400 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 PRELID3BQ9Y3B1 194 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 AMMECR1Q9Y4X0 333 aaPredicted RBP11.15□□□□□ -0.62
CCDC40-209ENST00000573474 INSIG2Q9Y5U4 225 aa11.15□□□□□ -0.62
CCDC40-209ENST00000573474 FASNP49327 2511 aaKnown RBP11.14□□□□□ -0.63
CCDC40-209ENST00000573474 DUXBA0A1W2PPF3 345 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 FAM25EA8MYX2 175 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 B4DSR2 109 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 CCSO14618 274 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 ADAP1O75689 374 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 GIPP09681 153 aaPredicted RBP11.14□□□□□ -0.63
CCDC40-209ENST00000573474 MMP9P14780 707 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 RPA2P15927 270 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 KIR2DS2P43631 304 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 DLX1P56177 255 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 H2BFSP57053 126 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 RAP2BP61225 183 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 PAX8Q06710 450 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 ZNF585BQ52M93 769 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 GGNBP1Q5YKI7 109 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 NCR3LG1Q68D85 454 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 LYZL2Q7Z4W2 148 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 SPAG16Q8N0X2 631 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 DRAXINQ8NBI3 349 aaPredicted RBP11.14□□□□□ -0.63
CCDC40-209ENST00000573474 RBPMSQ93062 196 aaKnown RBP11.14□□□□□ -0.63
CCDC40-209ENST00000573474 ST6GALNAC6Q969X2 333 aa11.14□□□□□ -0.63
CCDC40-209ENST00000573474 FYTTD1Q96QD9 318 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms