RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 IGKV1D-17A0A075B6S4 117 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 A0A0A6YYH2 397 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 A0A0B4J203 849 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 A0A0U1RQV5 110 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 LOC107986453A0A1B0GWG9 222 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 A6NJ64 397 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 LINC01548A6NM66 108 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 ANXA2P2A6NMY6 339 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 GABARAPH6UMI1 98 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 HSPA12AO43301 675 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 LYRM1O43325 122 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 AKR7A2O43488 359 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 LANCL1O43813 399 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 H2AFB1P0C5Y9 115 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 H2AFB2P0C5Z0 115 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 HSD11B1P28845 292 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 DLX6P56179 175 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 ZNF616Q08AN1 781 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 FOXE3Q13461 319 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 IL13RA2Q14627 380 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 HES5Q5TA89 166 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 GLT8D1Q68CQ7 371 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 CORO6Q6QEF8 472 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 RBPMS2Q6ZRY4 209 aaKnown RBP5.28□□□□□ -1.56
CHD3-213ENST00000571249 SLC35E3Q7Z769 313 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 FOXRED2Q8IWF2 684 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 OR2AE1Q8NHA4 323 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 TSEN15Q8WW01 171 aaKnown RBP5.28□□□□□ -1.56
CHD3-213ENST00000571249 GLMPQ8WWB7 406 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 ARPC1AQ92747 370 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 DLX4Q92988 240 aaPredicted RBP5.28□□□□□ -1.56
CHD3-213ENST00000571249 ITFG2Q969R8 447 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 RNF183Q96D59 192 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 S100A16Q96FQ6 103 aaKnown RBP5.28□□□□□ -1.56
CHD3-213ENST00000571249 NEDD4LQ96PU5 975 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 MARVELD1Q9BSK0 173 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 HDHD2Q9H0R4 259 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 HRH4Q9H3N8 390 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 CENPMQ9NSP4 180 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 CKLFQ9UBR5 152 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 MOB4Q9Y3A3 225 aa5.28□□□□□ -1.56
CHD3-213ENST00000571249 LRP2P98164 4655 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 MEX3AA1L020 520 aaKnown RBP5.27□□□□□ -1.57
CHD3-213ENST00000571249 DHRS7CA6NNS2 312 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 M0R2N4 97 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 MAS1P04201 325 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 ELANEP08246 267 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 PSG2P11465 335 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 HLA-DMAP28067 261 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 HTR1DP28221 377 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 BTCP35070 178 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 GSK3AP49840 483 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 SRSF3P84103 164 aaKnown RBP5.27□□□□□ -1.57
CHD3-213ENST00000571249 SSBP1Q04837 148 aaKnown RBP5.27□□□□□ -1.57
CHD3-213ENST00000571249 KLF9Q13886 244 aaPredicted RBP5.27□□□□□ -1.57
CHD3-213ENST00000571249 GPR176Q14439 515 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 RAB11BQ15907 218 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 LINC00322Q6ZN03 302 aaPredicted RBP5.27□□□□□ -1.57
CHD3-213ENST00000571249 CALHM1Q8IU99 346 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 SERPINA12Q8IW75 414 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 OR8B12Q8NGG6 310 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 OR52L2PQ8NGH6 319 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 OR56B2PQ8NGI1 322 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 OR6M1Q8NGM8 313 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 OR13C3Q8NGS6 347 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 OR10Z1Q8NGY1 313 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 CREB3L1Q96BA8 519 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 FAM3DQ96BQ1 224 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 C10orf35Q96D05 121 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 OR5B12Q96R08 314 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 OR4C12Q96R67 309 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 UQCC2Q9BRT2 126 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 TLNRD1Q9H1K6 362 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 RHBDL2Q9NX52 303 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 TAS2R4Q9NYW5 299 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 ZNF222Q9UK12 451 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 POLR1DQ9Y2S0 133 aa5.27□□□□□ -1.57
CHD3-213ENST00000571249 A0A0J9YWU9 116 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 TMEM272A0A1B0GTI8 110 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 NAP1L6A6NFF2 107 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 ANKRD30BLA7E2S9 258 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 USP17L23D6RBM5 183 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 SULT1C2O00338 296 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 SYT7O43581 403 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 ORC5O43913 435 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 IGHG2P01859 326 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 OR8U9P0C7N5 309 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 ANOS1P23352 680 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 CDK2P24941 298 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 HTR2CP28335 458 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 BDKRB2P30411 391 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 CX3CR1P49238 355 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 SLURP1P55000 103 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 ZNF121P58317 390 aaPredicted RBP5.26□□□□□ -1.57
CHD3-213ENST00000571249 GNB1P62873 340 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 QRFPP83859 136 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 ODF4Q2M2E3 257 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 SNAI3Q3KNW1 292 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 GLYATL3Q5SZD4 288 aa5.26□□□□□ -1.57
CHD3-213ENST00000571249 FAM53AQ6NSI3 398 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms