RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 FAM53AQ6NSI3 398 aaPredicted RBP14.35□□□□□ -0.11
RPAIN-208ENST00000571043 DEFB108BQ8NET1 73 aa14.35□□□□□ -0.11
RPAIN-208ENST00000571043 C5orf30Q96GV9 206 aa14.35□□□□□ -0.11
RPAIN-208ENST00000571043 CXorf58Q96LI9 332 aa14.35□□□□□ -0.11
RPAIN-208ENST00000571043 CCL13Q99616 98 aa14.35□□□□□ -0.11
RPAIN-208ENST00000571043 AGMATQ9BSE5 352 aa14.35□□□□□ -0.11
RPAIN-208ENST00000571043 DYNLRB1Q9NP97 96 aa14.35□□□□□ -0.11
RPAIN-208ENST00000571043 GNG12Q9UBI6 72 aa14.35□□□□□ -0.11
RPAIN-208ENST00000571043 CHD3Q12873 2000 aaKnown RBP14.34□□□□□ -0.11
RPAIN-208ENST00000571043 TRGV10A0A0A0MS01 117 aa14.34□□□□□ -0.11
RPAIN-208ENST00000571043 IGHV3-43A0A0B4J1X8 118 aa14.34□□□□□ -0.11
RPAIN-208ENST00000571043 IGHV3-43DP0DP04 118 aa14.34□□□□□ -0.11
RPAIN-208ENST00000571043 ZNF16P17020 682 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-208ENST00000571043 POLR2GP62487 172 aaKnown RBP eCLIP14.34□□□□□ -0.11
RPAIN-208ENST00000571043 TMEM30BQ3MIR4 351 aa14.34□□□□□ -0.11
RPAIN-208ENST00000571043 MORN2Q502X0 79 aa14.34□□□□□ -0.11
RPAIN-208ENST00000571043 CXorf66Q5JRM2 361 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-208ENST00000571043 FAM74A1Q5RGS3 127 aa14.34□□□□□ -0.11
RPAIN-208ENST00000571043 RPL7L1Q6DKI1 246 aaKnown RBP14.34□□□□□ -0.11
RPAIN-208ENST00000571043 RNASE11Q8TAA1 199 aaKnown RBP14.34□□□□□ -0.11
RPAIN-208ENST00000571043 CORO2AQ92828 525 aa14.34□□□□□ -0.11
RPAIN-208ENST00000571043 HSD17B10Q99714 261 aaKnown RBP14.34□□□□□ -0.11
RPAIN-208ENST00000571043 USF3Q68DE3 2245 aa14.33□□□□□ -0.11
RPAIN-208ENST00000571043 A0A0G2JRQ6 117 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 KBTBD11-OT1A0A1B0GTJ5 212 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 TMEM178BH3BS89 294 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 ATG12O94817 140 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 IGKV1-5P01602 117 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 SELLP14151 372 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 LOXL3P58215 753 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 AANATQ16613 207 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 DTX2Q86UW9 622 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 TGIF2LYQ8IUE0 185 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 OR2C3Q8N628 320 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 REG4Q9BYZ8 158 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 LINC00574Q9H8X3 128 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 SDHAF2Q9NX18 166 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 DCAF16Q9NXF7 216 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 CLN8Q9UBY8 286 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 PSG11Q9UQ72 335 aa14.33□□□□□ -0.12
RPAIN-208ENST00000571043 PPIAL4EA0A075B759 164 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 MFSD2BA6NFX1 497 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 PPIAL4DF5H284 164 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 FGF16O43320 207 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 PPIAL4FP0DN26 164 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 LPAR6P43657 344 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 AKR1C2P52895 323 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 RPL30P62888 115 aaKnown RBP14.32□□□□□ -0.12
RPAIN-208ENST00000571043 VAMP2P63027 116 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 C17orf58Q2M2W7 97 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 ZCCHC24Q8N2G6 241 aaKnown RBP14.32□□□□□ -0.12
RPAIN-208ENST00000571043 UBAC2Q8NBM4 344 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 RNF141Q8WVD5 230 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 SLC25A31Q9H0C2 315 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 CBLN4Q9NTU7 201 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 TMEM106BQ9NUM4 274 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 GAB2Q9UQC2 676 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 PPIAL4AQ9Y536 164 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 ABCA12Q86UK0 2595 aa14.32□□□□□ -0.12
RPAIN-208ENST00000571043 ZNF729A6NN14 1252 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-208ENST00000571043 KIAA1324LA8MWY0 1029 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-208ENST00000571043 WRBO00258 174 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 ST8SIA5O15466 376 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 SOD3P08294 240 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 C11orf71Q6IPW1 123 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 DUX4L9Q6RFH8 374 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-208ENST00000571043 HSD17B13Q7Z5P4 300 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-208ENST00000571043 FGFRL1Q8N441 504 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 EIF4E3Q8N5X7 224 aaKnown RBP14.31□□□□□ -0.12
RPAIN-208ENST00000571043 FAM216BQ8N7L0 139 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 TCTEX1D2Q8WW35 142 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 ARV1Q9H2C2 271 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 UBTD1Q9HAC8 227 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 BARX1Q9HBU1 254 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-208ENST00000571043 LYRM2Q9NU23 88 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-208ENST00000571043 GFOD1Q9NXC2 390 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 COA4Q9NYJ1 87 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 MMP24Q9Y5R2 645 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 FBN2P35556 2912 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 ARID1AO14497 2285 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 BORCS7-ASMTA0A0B4J1R7 106 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 SSSCA1O60232 199 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 EPHA1P21709 976 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 GPR12P47775 334 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 RAB7AP51149 207 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 EWSR1Q01844 656 aaKnown RBP eCLIP14.31□□□□□ -0.12
RPAIN-208ENST00000571043 LTC4SQ16873 150 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 Q6ZRM9 215 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 SPAG16Q8N0X2 631 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 CD300LFQ8TDQ1 290 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 TMED6Q8WW62 240 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 RAB40CQ96S21 281 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 CACNG5Q9UF02 275 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 LAMP3Q9UQV4 416 aa14.31□□□□□ -0.12
RPAIN-208ENST00000571043 HECTD1Q9ULT8 2610 aa14.3□□□□□ -0.12
RPAIN-208ENST00000571043 hADV38S2A0JD32 116 aa14.3□□□□□ -0.12
RPAIN-208ENST00000571043 MEX3AA1L020 520 aaKnown RBP14.3□□□□□ -0.12
RPAIN-208ENST00000571043 FAM24AA6NFZ4 105 aa14.3□□□□□ -0.12
RPAIN-208ENST00000571043 TNFRSF13BO14836 293 aaPredicted RBP14.3□□□□□ -0.12
RPAIN-208ENST00000571043 CHST1O43916 411 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms