RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 CEACAM16Q2WEN9 425 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 ZNF585BQ52M93 769 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 ZNF468Q5VIY5 522 aaPredicted RBP13.05□□□□□ -0.32
SMG6-207ENST00000570756 DMRTA1Q5VZB9 504 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 NUFIP2Q7Z417 695 aaKnown RBP13.05□□□□□ -0.32
SMG6-207ENST00000570756 SFRP2Q96HF1 295 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 CHODLQ9H9P2 273 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 PATZ1Q9HBE1 687 aaKnown RBP13.05□□□□□ -0.32
SMG6-207ENST00000570756 PAM16Q9Y3D7 125 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 SPEGQ15772 3267 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 ABCA7Q8IZY2 2146 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 CUL9Q8IWT3 2517 aa13.05□□□□□ -0.32
SMG6-207ENST00000570756 RNF212BA8MTL3 300 aa13.04□□□□□ -0.32
SMG6-207ENST00000570756 F6UZH7 168 aa13.04□□□□□ -0.32
SMG6-207ENST00000570756 KRASP01116 189 aa13.04□□□□□ -0.32
SMG6-207ENST00000570756 NPPCP23582 126 aa13.04□□□□□ -0.32
SMG6-207ENST00000570756 PMP22Q01453 160 aa13.04□□□□□ -0.32
SMG6-207ENST00000570756 OR10P1Q8NGE3 313 aa13.04□□□□□ -0.32
SMG6-207ENST00000570756 OR5P3Q8WZ94 311 aa13.04□□□□□ -0.32
SMG6-207ENST00000570756 KCNS2Q9ULS6 477 aa13.04□□□□□ -0.32
SMG6-207ENST00000570756 ZFP30Q9Y2G7 519 aa13.04□□□□□ -0.32
SMG6-207ENST00000570756 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.04□□□□□ -0.32
SMG6-207ENST00000570756 IGLV2-14P01704 120 aa13.04□□□□□ -0.32
SMG6-207ENST00000570756 EPHA8P29322 1005 aaPredicted RBP13.04□□□□□ -0.32
SMG6-207ENST00000570756 CDC34P49427 236 aaPredicted RBP13.04□□□□□ -0.32
SMG6-207ENST00000570756 RIPPLY2Q5TAB7 128 aa13.04□□□□□ -0.32
SMG6-207ENST00000570756 NPCDR1Q9BY65 106 aa13.04□□□□□ -0.32
SMG6-207ENST00000570756 KCNIP2Q9NS61 270 aa13.04□□□□□ -0.32
SMG6-207ENST00000570756 CBR3O75828 277 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 TIAF1O95411 115 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 SYNGR4O95473 234 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 SRFP11831 508 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 KITLGP21583 273 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 NXPH1P58417 271 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 MSMO1Q15800 293 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 FGFRL1Q8N441 504 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 TSTD1Q8NFU3 115 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 OR5AU1Q8NGC0 362 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 FGFBP3Q8TAT2 258 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 OR6C1Q96RD1 312 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 HSPB9Q9BQS6 159 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 OR1A1Q9P1Q5 309 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 HSPB7Q9UBY9 170 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 TRAV9-1A0A075B6T8 112 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 GRIFINA4D1Z8 144 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 CRISP2P16562 243 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 SELEP16581 610 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 GNB1P62873 340 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 ANKRD39Q53RE8 183 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 COLCA1Q6ZS62 124 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 MOB1BQ7L9L4 216 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 PRR18Q8N4B5 295 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 RDH5Q92781 318 aa13.03□□□□□ -0.32
SMG6-207ENST00000570756 GMPPAQ96IJ6 420 aaPredicted RBP13.03□□□□□ -0.32
SMG6-207ENST00000570756 YLPM1P49750 1951 aaKnown RBP13.02□□□□□ -0.32
SMG6-207ENST00000570756 SIAH2O43255 324 aa13.02□□□□□ -0.32
SMG6-207ENST00000570756 NDUFB4O95168 129 aa13.02□□□□□ -0.32
SMG6-207ENST00000570756 TDRG1Q3Y452 100 aa13.02□□□□□ -0.32
SMG6-207ENST00000570756 TCF23Q7RTU1 214 aa13.02□□□□□ -0.32
SMG6-207ENST00000570756 MRPL21Q7Z2W9 205 aaKnown RBP13.02□□□□□ -0.32
SMG6-207ENST00000570756 OR4B1Q8NGF8 309 aa13.02□□□□□ -0.32
SMG6-207ENST00000570756 VN1R17PQ8TDU5 208 aa13.02□□□□□ -0.32
SMG6-207ENST00000570756 DTD1Q8TEA8 209 aa13.02□□□□□ -0.32
SMG6-207ENST00000570756 FGF23Q9GZV9 251 aaPredicted RBP13.02□□□□□ -0.32
SMG6-207ENST00000570756 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
SMG6-207ENST00000570756 C1QTNF9P0C862 333 aa13.02□□□□□ -0.33
SMG6-207ENST00000570756 CCL3P10147 92 aa13.02□□□□□ -0.33
SMG6-207ENST00000570756 NTF4P34130 210 aa13.02□□□□□ -0.33
SMG6-207ENST00000570756 TMEM249Q2WGJ8 235 aa13.02□□□□□ -0.33
SMG6-207ENST00000570756 AGBL5Q8NDL9 886 aa13.02□□□□□ -0.33
SMG6-207ENST00000570756 SGCZQ96LD1 299 aa13.02□□□□□ -0.33
SMG6-207ENST00000570756 TXNDC17Q9BRA2 123 aa13.02□□□□□ -0.33
SMG6-207ENST00000570756 SAMD10Q9BYL1 202 aa13.02□□□□□ -0.33
SMG6-207ENST00000570756 ASCL3Q9NQ33 180 aa13.02□□□□□ -0.33
SMG6-207ENST00000570756 AURKAIP1Q9NWT8 199 aaPredicted RBP13.02□□□□□ -0.33
SMG6-207ENST00000570756 TRAV24A0A0B4J272 114 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 WDR1O75083 606 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 CRYAAP02489 173 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 CD33P20138 364 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 RAB7AP51149 207 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 CARD18P57730 90 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 TFF3Q07654 80 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 LRP11Q86VZ4 500 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 OR5A2Q8NGI9 324 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 RARRES3Q9UL19 164 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 WIPI2Q9Y4P8 454 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 ZNF716A6NP11 495 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 SERF1AO75920 110 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 MYF5P13349 255 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 SYT13Q7L8C5 426 aa13.01□□□□□ -0.33
SMG6-207ENST00000570756 CPEB3Q8NE35 698 aaKnown RBP13.01□□□□□ -0.33
SMG6-207ENST00000570756 CIB3Q96Q77 187 aaPredicted RBP13.01□□□□□ -0.33
SMG6-207ENST00000570756 TECTAO75443 2155 aa13□□□□□ -0.33
SMG6-207ENST00000570756 TNRC6BQ9UPQ9 1833 aaKnown RBP13□□□□□ -0.33
SMG6-207ENST00000570756 A0A1W2PR80 420 aa13□□□□□ -0.33
SMG6-207ENST00000570756 SYNGR1O43759 233 aa13□□□□□ -0.33
SMG6-207ENST00000570756 CYC1P08574 325 aa13□□□□□ -0.33
SMG6-207ENST00000570756 VWC2Q2TAL6 325 aa13□□□□□ -0.33
SMG6-207ENST00000570756 MYPOPQ86VE0 399 aaPredicted RBP13□□□□□ -0.33
SMG6-207ENST00000570756 BAGE3Q86Y29 109 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms