RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 ARTNQ5T4W7 220 aa13.16□□□□□ -0.3
CIITA-204ENST00000570546 CDCP2Q5VXM1 449 aa13.16□□□□□ -0.3
CIITA-204ENST00000570546 IL19Q9UHD0 177 aa13.16□□□□□ -0.3
CIITA-204ENST00000570546 ACP1P24666 158 aa13.16□□□□□ -0.3
CIITA-204ENST00000570546 GSX1Q9H4S2 264 aaPredicted RBP13.16□□□□□ -0.3
CIITA-204ENST00000570546 BET1LQ9NYM9 111 aa13.16□□□□□ -0.3
CIITA-204ENST00000570546 THYN1Q9P016 225 aa13.16□□□□□ -0.3
CIITA-204ENST00000570546 KCNMB2Q9Y691 235 aa13.16□□□□□ -0.3
CIITA-204ENST00000570546 SMIM8Q96KF7 97 aa13.16□□□□□ -0.3
CIITA-204ENST00000570546 GAMTQ14353 236 aa13.16□□□□□ -0.3
CIITA-204ENST00000570546 C11orf42Q8N5U0 333 aa13.16□□□□□ -0.3
CIITA-204ENST00000570546 OR8G5Q8NG78 346 aa13.16□□□□□ -0.3
CIITA-204ENST00000570546 ZNF71Q9NQZ8 489 aaPredicted RBP13.16□□□□□ -0.3
CIITA-204ENST00000570546 SLC25A10Q9UBX3 287 aaPredicted RBP13.16□□□□□ -0.3
CIITA-204ENST00000570546 M0QZK8 103 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 TCAPO15273 167 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 GGCTO75223 188 aaKnown RBP13.15□□□□□ -0.3
CIITA-204ENST00000570546 S100A4P26447 101 aaKnown RBP13.15□□□□□ -0.3
CIITA-204ENST00000570546 OR5P3Q8WZ94 311 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 CSN3P07498 182 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 REG1BP48304 166 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 LY6G6FQ5SQ64 297 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 ATRAIDQ6UW56 229 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 FAM216AQ8WUB2 273 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 DICER1Q9UPY3 1922 aaKnown RBP13.15□□□□□ -0.3
CIITA-204ENST00000570546 hCG_38984A0A1B0GV85 526 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 OR2V2Q96R30 315 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 GOLT1BQ9Y3E0 138 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 MPV17P39210 176 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 HIST3H3Q16695 136 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 GCSAMQ8N6F7 178 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 OR1P1Q8NH06 330 aa13.15□□□□□ -0.3
CIITA-204ENST00000570546 SPAARA0A1B0GVQ0 90 aa13.15□□□□□ -0.31
CIITA-204ENST00000570546 K7N7A8 449 aa13.15□□□□□ -0.31
CIITA-204ENST00000570546 ZG16O60844 167 aa13.15□□□□□ -0.31
CIITA-204ENST00000570546 STXBP6Q8NFX7 210 aa13.15□□□□□ -0.31
CIITA-204ENST00000570546 VN1R17PQ8TDU5 208 aa13.15□□□□□ -0.31
CIITA-204ENST00000570546 RASL11BQ9BPW5 248 aa13.15□□□□□ -0.31
CIITA-204ENST00000570546 CCL13Q99616 98 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 RTN4RQ9BZR6 473 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 OR51M1Q9H341 326 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 SMPD2O60906 423 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 S1PR2O95136 353 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 COL8A1P27658 744 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 GLIPR1P48060 266 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 SLC25A53Q5H9E4 307 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 WDR25Q64LD2 544 aaPredicted RBP13.14□□□□□ -0.31
CIITA-204ENST00000570546 OR8B3Q8NGG8 313 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 OR8B2Q96RD0 313 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 TBX15Q96SF7 602 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 RAB1BQ9H0U4 201 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 FAM157AC9JC47 383 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 APELAP0DMC3 54 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 HIST1H1EP10412 219 aaKnown RBP13.14□□□□□ -0.31
CIITA-204ENST00000570546 HIST1H1BP16401 226 aaKnown RBP13.14□□□□□ -0.31
CIITA-204ENST00000570546 FADS6Q8N9I5 356 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 RAB24Q969Q5 203 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 STARD4Q96DR4 205 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 PAXXQ9BUH6 204 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 TMEM191AQ9H0A3 160 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 A0A1W2PRD5 423 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 A0A1W2PRF3 423 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 A0A1W2PRM7 423 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 CBY3A6NI87 242 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 RFPL3SP0C7P2 107 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 SMIM17P0DL12 118 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 RPL31P62899 125 aaKnown RBP13.14□□□□□ -0.31
CIITA-204ENST00000570546 MIC13Q5XKP0 118 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 ZNF343Q6P1L6 599 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 TXNDC17Q9BRA2 123 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 PAM16Q9Y3D7 125 aa13.14□□□□□ -0.31
CIITA-204ENST00000570546 DNASE2O00115 360 aaPredicted RBP13.13□□□□□ -0.31
CIITA-204ENST00000570546 WDFY1Q8IWB7 410 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 OR2D3Q8NGH3 330 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 RAB1CQ92928 201 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 TMEM45BQ96B21 275 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 GALNT14Q96FL9 552 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 ZNF552Q9H707 407 aaPredicted RBP13.13□□□□□ -0.31
CIITA-204ENST00000570546 INSIG2Q9Y5U4 225 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 ZNF735P0CB33 412 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 P2RY6Q15077 328 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 KHDC1LQ5JSQ8 128 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 ISLRO14498 428 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 CDX1P47902 265 aaPredicted RBP13.13□□□□□ -0.31
CIITA-204ENST00000570546 ZNF506Q5JVG8 444 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 PPP1R32Q7Z5V6 425 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 EIF4E3Q8N5X7 224 aaKnown RBP13.13□□□□□ -0.31
CIITA-204ENST00000570546 CA5BP1Q8WTZ4 195 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 RNF126Q9BV68 326 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 LINC00470Q9BZP3 86 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 GNG7O60262 68 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 PAFAH1B2P68402 229 aa13.13□□□□□ -0.31
CIITA-204ENST00000570546 KLF14Q8TD94 323 aaPredicted RBP13.13□□□□□ -0.31
CIITA-204ENST00000570546 PRR33A8MZF0 331 aa13.12□□□□□ -0.31
CIITA-204ENST00000570546 C16orf97H3BN30 126 aa13.12□□□□□ -0.31
CIITA-204ENST00000570546 ZIC3O60481 467 aa13.12□□□□□ -0.31
CIITA-204ENST00000570546 RPLP1P05386 114 aaKnown RBP13.12□□□□□ -0.31
CIITA-204ENST00000570546 RIGQ13278 110 aa13.12□□□□□ -0.31
CIITA-204ENST00000570546 C1orf185Q5T7R7 199 aa13.12□□□□□ -0.31
CIITA-204ENST00000570546 DRAM1Q8N682 238 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms