RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 UBE2MP61081 183 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 PPP1R1AQ13522 171 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 TATDN3Q17R31 274 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 ZNF626Q68DY1 528 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 ODF3L1Q8IXM7 274 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 OR4P4Q8NGL7 312 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 GPHA2Q96T91 129 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 S1PR3Q99500 378 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 SEC22CQ9BRL7 303 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 NAA60Q9H7X0 242 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 CRYM-AS1A6NIL9 109 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 PGLYRP1O75594 196 aaPredicted RBP12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 IL5P05113 134 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 OR4E1P0C645 316 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 TMEM128Q5BJH2 165 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 C11orf88Q6PI97 169 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 SPNS3Q6ZMD2 512 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 TBC1D26Q86UD7 250 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 SGPP2Q8IWX5 399 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 OR51H1Q8NH63 302 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 ALX4Q9H161 411 aaPredicted RBP12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 GHITMQ9H3K2 345 aa12.54□□□□□ -0.4
HERPUD1-219ENST00000570273 TRAV40A0A0B4J280 105 aa12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 A0A0B4J293 547 aa12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 RNF212BA8MTL3 300 aa12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 BUB1B-PAK6H3BSN5 160 aa12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 MPPED1O15442 326 aa12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 HLA-AP01891 365 aaKnown RBP12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 UBE2E1P51965 193 aa12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 CATR1Q13166 79 aa12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 GLDNQ6ZMI3 551 aaPredicted RBP12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 ZNF833PQ6ZTB9 187 aa12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 OR52B4Q8NGK2 314 aa12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 GPN1Q9HCN4 374 aaPredicted RBP12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 GAB2Q9UQC2 676 aa12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 ALG5Q9Y673 324 aa12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 HIVEP1P15822 2718 aa12.53□□□□□ -0.4
HERPUD1-219ENST00000570273 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.52□□□□□ -0.43e-7■■■□□ 17.7
HERPUD1-219ENST00000570273 hCG_2014768A0A024R1R8 64 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 IGHV3OR16-10A0A075B7F0 116 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 HTR1DP28221 377 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 REG1BP48304 166 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 ZNF137PP52743 207 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 LGALS4P56470 323 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 DHODHQ02127 395 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 CBX3Q13185 183 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 DHRS2Q13268 280 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 EIF4EBP1Q13541 118 aaPredicted RBP12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 SLC9A3R2Q15599 337 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 GPR157Q5UAW9 335 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 FAM71F2Q6NXP2 309 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 ZNF66Q6ZN08 573 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 C1orf229Q6ZS94 237 aaPredicted RBP12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 KCTD9Q7L273 389 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 LYG2Q86SG7 212 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 CASTOR1Q8WTX7 329 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 TCTEX1D2Q8WW35 142 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 RPEQ96AT9 228 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 HSD17B10Q99714 261 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 ZNF251Q9BRH9 671 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 MRPL20Q9BYC9 149 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 LIN7CQ9NUP9 197 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 WNK2Q9Y3S1 2297 aa12.52□□□□□ -0.41
HERPUD1-219ENST00000570273 CENPVL3A0A0U1RRI6 287 aa12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 C9orf170A2RU37 121 aa12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 C7orf66A4D0T2 115 aa12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 LEUTXA8MZ59 168 aa12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 PROP1O75360 226 aa12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 SFT2D2O95562 160 aa12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 IFNA2P01563 188 aa12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 ANXA3P12429 323 aa12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 DUTP33316 252 aaKnown RBP12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 CEACAM3P40198 252 aa12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 RPL30P62888 115 aaKnown RBP12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 SUPT4H1P63272 117 aaKnown RBP12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 DIAPH2-AS1Q14236 149 aa12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 TGIF2LXQ8IUE1 241 aa12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 DRAXINQ8NBI3 349 aaPredicted RBP12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 ZNF431Q8TF32 576 aaPredicted RBP12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 DPM3Q9P2X0 92 aa12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 KCNIP3Q9Y2W7 256 aa12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 TBL2Q9Y4P3 447 aaKnown RBP12.51□□□□□ -0.41
HERPUD1-219ENST00000570273 A0A0A6YYJ9 748 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 IGHV1-69DA0A0B4J2H0 117 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 C3orf85A0A1B0GTC6 90 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 A0A1B0GVG6 124 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 H0Y980 276 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 NPFFO15130 113 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 CREBL2O60519 120 aaPredicted RBP12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 AVPP01185 164 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 IGHV1-69P01742 117 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 OR5AC1P0C628 307 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 IGHV4-38-2P0DP08 117 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 F2RP25116 425 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 THBS3P49746 956 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 OR2B11Q5JQS5 317 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 TPTE2P1Q5T6R2 138 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 MINOS1Q5TGZ0 78 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 LHFPL4Q7Z7J7 247 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 ST6GALNAC6Q969X2 333 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms