RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 RASL10AQ92737 203 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 SLC25A44Q96H78 314 aaPredicted RBP2.41□□□□□ -2.02
CNOT1-221ENST00000569924 PPP1R36Q96LQ0 422 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 C1orf147Q96MC9 270 aaPredicted RBP2.41□□□□□ -2.02
CNOT1-221ENST00000569924 DUX3Q96PT4 197 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 TSPAN32Q96QS1 320 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 SH3GL3Q99963 347 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 AGMATQ9BSE5 352 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 EMC6Q9BV81 110 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 TMEM109Q9BVC6 243 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 C20orf27Q9GZN8 174 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 TMEM27Q9HBJ8 222 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 TMEM38BQ9NVV0 291 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 KLHL21Q9UJP4 597 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 UGT2A1Q9Y4X1 527 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 TANC2Q9HCD6 1990 aa2.41□□□□□ -2.02
CNOT1-221ENST00000569924 MUC2Q02817 5179 aa2.4□□□□□ -2.02
CNOT1-221ENST00000569924 IGHV3OR16-10A0A075B7F0 116 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 IGKV1D-13A0A0B4J2D9 117 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 A0A0G2JLM5 398 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 ANKRD20A5PA0PJZ0 165 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 TMEM213A2RRL7 107 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 ISPDA4D126 451 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 GMNCA6NCL1 334 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 A6NDN8 102 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 PRORSD1PA6NEY8 169 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 C5orf58C9J3I9 102 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 C12orf77C9JDV5 145 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 H0YHG0 523 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 TRAPPC2LH3BP13 241 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 K7EMT4 169 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 NME4O00746 187 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 AGPAT2O15120 278 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 UBDO15205 165 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 HDAC3O15379 428 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 NUPL2O15504 423 aaKnown RBP2.4□□□□□ -2.03
CNOT1-221ENST00000569924 CHP2O43745 196 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 TPST1O60507 370 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 SERPINB7O75635 380 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 SNAPINO95295 136 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 FSTL3O95633 263 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 SEMG1P04279 462 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 OCMP0CE72 109 aaPredicted RBP2.4□□□□□ -2.03
CNOT1-221ENST00000569924 PGA4P0DJD7 388 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 PGA3P0DJD8 388 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 IGKV1-13P0DP09 117 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 PPIBP23284 216 aaKnown RBP2.4□□□□□ -2.03
CNOT1-221ENST00000569924 APLNRP35414 380 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 MPV17P39210 176 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 POLR2JP52435 117 aaKnown RBP2.4□□□□□ -2.03
CNOT1-221ENST00000569924 ZNF133P52736 654 aaPredicted RBP2.4□□□□□ -2.03
CNOT1-221ENST00000569924 DLX1P56177 255 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 ERVS71-1P61550 626 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 NCALDP61601 193 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 GLO1Q04760 184 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 PAX8Q06710 450 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 IFFO1Q0D2I5 559 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 DGCR6Q14129 220 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 ZNF726P1Q15940 193 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 ZBED5Q49AG3 693 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 C1orf100Q5SVJ3 147 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 C10orf128Q5T292 105 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 LCE5AQ5TCM9 118 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 HHATQ5VTY9 493 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 UBE2UQ5VVX9 321 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 RNLSQ5VYX0 342 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 FAHD1Q6P587 224 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 ZNF613Q6PF04 617 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 LRRN1Q6UXK5 716 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 ZNF620Q6ZNG0 422 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 SSX6Q7RTT6 188 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 LRRC28Q86X40 367 aaPredicted RBP2.4□□□□□ -2.03
CNOT1-221ENST00000569924 CBLN2Q8IUK8 224 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 ZNF101Q8IZC7 436 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 ZNF283Q8N7M2 679 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 ZNF565Q8N9K5 539 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 OR4K5Q8NGD3 323 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 KLF14Q8TD94 323 aaPredicted RBP2.4□□□□□ -2.03
CNOT1-221ENST00000569924 C22orf15Q8WYQ4 148 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 CCL17Q92583 94 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 MAL2Q969L2 176 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 FAM210AQ96ND0 272 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 CIB1Q99828 191 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 ZNF251Q9BRH9 671 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 WACQ9BTA9 647 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 RSPO3Q9BXY4 272 aaPredicted RBP2.4□□□□□ -2.03
CNOT1-221ENST00000569924 SLC19A3Q9BZV2 496 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 SLCO1B3Q9NPD5 702 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 MMP26Q9NRE1 261 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 TMEM106BQ9NUM4 274 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 CLEC5AQ9NY25 188 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 TAS2R5Q9NYW4 299 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 VAPAQ9P0L0 249 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 XCL2Q9UBD3 114 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 Q9UF83 564 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 OR5V1Q9UGF6 321 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 INSIG2Q9Y5U4 225 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 CACNG2Q9Y698 323 aa2.4□□□□□ -2.03
CNOT1-221ENST00000569924 DOCK11Q5JSL3 2073 aa2.39□□□□□ -2.03
CNOT1-221ENST00000569924 IGKV2D-30A0A075B6S6 120 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms