RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 MTCP1P56278 107 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 DLK1P80370 383 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 MS4A2Q01362 244 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 FLOT2Q14254 428 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 PSG5Q15238 335 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 FAM98BQ52LJ0 330 aaKnown RBP4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 ZNF585BQ52M93 769 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 LCE2AQ5TA79 106 aaPredicted RBP4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 C1orf146Q5VVC0 180 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 LAMTOR1Q6IAA8 161 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 GSG1LQ6UXU4 331 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 ELMOD2Q8IZ81 293 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 CNIH3Q8TBE1 160 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 FAM46BQ96A09 425 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 SLC7A6OSQ96CW6 309 aaPredicted RBP4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 MROQ9BYG7 248 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 MOB1AQ9H8S9 216 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 GORASP2Q9H8Y8 452 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 FAM212BQ9NTI7 297 aaPredicted RBP4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 IL20Q9NYY1 176 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 GNG12Q9UBI6 72 aa4.63□□□□□ -1.67
HERPUD1-217ENST00000569429 OR5H14A6NHG9 310 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 SELENOFO60613 162 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 SRSF10O75494 262 aaKnown RBP4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 DIRAS1O95057 198 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 GADD45GO95257 159 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 OR9G9P0C7N8 305 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 MYOD1P15172 320 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 RRM2P31350 389 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 MC5RP33032 325 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 SMIM11AP58511 58 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 ROM1Q03395 351 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 TSPAN31Q12999 210 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 FAM71F2Q6NXP2 309 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 Q6ZRN7 208 aaPredicted RBP4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 ZNF679Q8IYX0 411 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 SAXO1Q8IYX7 474 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 BBS1Q8NFJ9 593 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 OR10V1Q8NGI7 309 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 C10orf35Q96D05 121 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 Q9H3A6 140 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 SLC2A9Q9NRM0 540 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 BAIAP2Q9UQB8 552 aa4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 EXOSC1Q9Y3B2 195 aaKnown RBP4.62□□□□□ -1.67
HERPUD1-217ENST00000569429 LPAP08519 4548 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 IGKV1-9A0A0C4DH69 117 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 TMEM30CPA0ZSE6 113 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 ANKRD65E5RJM6 399 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 H0YJW9 148 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 TNFRSF11BO00300 401 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 PRODHO43272 600 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 CST1P01037 141 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 SPART-AS1P0CW21 52 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 MT1HL1P0DM35 61 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 ATP6V1B2P21281 511 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 ARL3P36405 182 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 RIDAP52758 137 aaKnown RBP4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 RIPK1Q13546 671 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 PTGES3Q15185 160 aaKnown RBP4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 MICAQ29983 383 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 C15orf32Q32M92 178 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 MORN2Q502X0 79 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 C6orf141Q5SZD1 244 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 TMEM88Q6PEY1 159 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 UNQ9165/PRO28630Q6UXU0 137 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 SERPINA12Q8IW75 414 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 NECAP1Q8NC96 275 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 OR8D4Q8NGM9 314 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 GNPDA2Q8TDQ7 276 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 PP6455Q8WZ26 134 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 TSNAXQ99598 290 aaKnown RBP4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 ABHD14AQ9BUJ0 271 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 Q9H8V8 135 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 MED20Q9H944 212 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 RAB9BQ9NP90 201 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 NDUFAF4Q9P032 175 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 FRRS1LQ9P0K9 344 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 ENOPH1Q9UHY7 261 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 LAMP5Q9UJQ1 280 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 TBC1D24Q9ULP9 559 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 POMPQ9Y244 141 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 WASHC3Q9Y3C0 194 aa4.61□□□□□ -1.67
HERPUD1-217ENST00000569429 SAA2-SAA4A0A096LPE2 208 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 AQP12BA6NM10 295 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 PRR32B1ATL7 298 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 SPINT2O43291 252 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 IFNGP01579 166 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 SAA2P0DJI9 122 aaPredicted RBP4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 CT45A6P0DMU7 189 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 CT45A5P0DMU8 189 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 CT45A7P0DMV0 189 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 DBTP11182 482 aaKnown RBP4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 ZNF3P17036 446 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 PRKACBP22694 351 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 IFNGR2P38484 337 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 CCL18P55774 89 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 KRTAP10-4P60372 401 aaPredicted RBP4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 ERVFC1-1P60608 527 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 PPP1R8Q12972 351 aaKnown RBP4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 ALKBH1Q13686 389 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms