RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 FAM71F2Q6NXP2 309 aa12.96□□□□□ -0.33
USB1-215ENST00000569252 OR8H3Q8N146 312 aa12.96□□□□□ -0.33
USB1-215ENST00000569252 ZNF645Q8N7E2 425 aa12.96□□□□□ -0.33
USB1-215ENST00000569252 SIGLECL1Q8N7X8 197 aa12.96□□□□□ -0.33
USB1-215ENST00000569252 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.96□□□□□ -0.33
USB1-215ENST00000569252 TSC22D3Q99576 134 aa12.96□□□□□ -0.33
USB1-215ENST00000569252 SLC5A7Q9GZV3 580 aa12.96□□□□□ -0.33
USB1-215ENST00000569252 SAA2-SAA4A0A096LPE2 208 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 LINC00854A0A1B0GVQ3 168 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 TUSC2O75896 110 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 VENTXO95231 258 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 FAM106CPP0CH98 169 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 SAA2P0DJI9 122 aaPredicted RBP12.95□□□□□ -0.34
USB1-215ENST00000569252 IL7P13232 177 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 REG1BP48304 166 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 ZNF816Q0VGE8 651 aaPredicted RBP12.95□□□□□ -0.34
USB1-215ENST00000569252 LSAMPQ13449 338 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 LRRC75BQ2VPJ9 315 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 CMTM1Q8IZ96 169 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 ZBTB34Q8NCN2 500 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 TERB2Q8NHR7 220 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 C17orf50Q8WW18 174 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 RTN4IP1Q8WWV3 396 aaPredicted RBP12.95□□□□□ -0.34
USB1-215ENST00000569252 SCGB3A2Q96PL1 93 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 SSX3Q99909 188 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 AGMATQ9BSE5 352 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 PARP12Q9H0J9 701 aaKnown RBP12.95□□□□□ -0.34
USB1-215ENST00000569252 IFI27L2Q9H2X8 130 aa12.95□□□□□ -0.34
USB1-215ENST00000569252 SOX21Q9Y651 276 aaPredicted RBP12.95□□□□□ -0.34
USB1-215ENST00000569252 NAP1L6A6NFF2 107 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 PGAM2P15259 253 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 ZNF137PP52743 207 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 CBX3Q13185 183 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 AANATQ16613 207 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 Q6YL49 198 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 ZNF833PQ6ZTB9 187 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 OR4C16Q8NGL9 310 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 OR56B4Q8NH76 319 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 OR5R1Q8NH85 324 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 ZFAND1Q8TCF1 268 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 SSMEM1Q8WWF3 244 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 CAPSLQ8WWF8 208 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 TRIM63Q969Q1 353 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 MOB3AQ96BX8 217 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 AKR1E2Q96JD6 320 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 HRASLSQ9HDD0 168 aa12.94□□□□□ -0.34
USB1-215ENST00000569252 IGHV1-3A0A0C4DH29 117 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 MDFIC2A0A1B0GVS7 189 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 M0R1X1 148 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 TCF21O43680 179 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 MC5RP33032 325 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 TAGLNQ01995 201 aaKnown RBP12.93□□□□□ -0.34
USB1-215ENST00000569252 KLF9Q13886 244 aaPredicted RBP12.93□□□□□ -0.34
USB1-215ENST00000569252 HES1Q14469 280 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 ABCA11PQ4W5N1 156 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 RPL39P5Q59GN2 51 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 ODF3L1Q8IXM7 274 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 SLC38A6Q8IZM9 456 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 OR4D10Q8NGI6 311 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 ST6GALNAC6Q969X2 333 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 ADTRPQ96IZ2 230 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 C7orf50Q9BRJ6 194 aaKnown RBP12.93□□□□□ -0.34
USB1-215ENST00000569252 SDHAF2Q9NX18 166 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 PITPNC1Q9UKF7 332 aa12.93□□□□□ -0.34
USB1-215ENST00000569252 A0A0A6YYJ9 748 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 VGLL3A8MV65 326 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 THBS3P49746 956 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 UCP3P55916 312 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 MSMO1Q15800 293 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 LDLRAD2Q5SZI1 272 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 ZNF660Q6AZW8 331 aaPredicted RBP12.92□□□□□ -0.34
USB1-215ENST00000569252 FAAP20Q6NZ36 180 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 C16orf87Q6PH81 154 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 C12orf54Q6X4T0 127 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 IDO2Q6ZQW0 420 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 LDLRAD3Q86YD5 345 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 DRAM1Q8N682 238 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 OR51S1Q8NGJ8 323 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 SDHCQ99643 169 aaPredicted RBP12.92□□□□□ -0.34
USB1-215ENST00000569252 PRDM13Q9H4Q3 707 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 CCL28Q9NRJ3 127 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 TNFRSF19Q9NS68 423 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 PRELID3BQ9Y3B1 194 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 POMT1Q9Y6A1 747 aa12.92□□□□□ -0.34
USB1-215ENST00000569252 IGKV1D-13A0A0B4J2D9 117 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 OR5H14A6NHG9 310 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 H3BUX3 64 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 H7C2Y5 167 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 GPR31O00270 319 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 TIMM23O14925 209 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 HOXA3O43365 443 aaPredicted RBP12.91□□□□□ -0.34
USB1-215ENST00000569252 APOA2P02652 100 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 IGKV1-13P0DP09 117 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 PAX6P26367 422 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 CD1BP29016 333 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 IER3P46695 156 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 RAB13P51153 203 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 DYNLT3P51808 116 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 DIAPH2-AS1Q14236 149 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 MZT2BQ6NZ67 158 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms