RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 TAS2R20P59543 309 aa10.33□□□□□ -0.76
CLK3-224ENST00000568605 ACTBP60709 375 aa10.33□□□□□ -0.76
CLK3-224ENST00000568605 SLC35E3Q7Z769 313 aa10.33□□□□□ -0.76
CLK3-224ENST00000568605 H1FOOQ8IZA3 346 aaPredicted RBP10.33□□□□□ -0.76
CLK3-224ENST00000568605 OR4X2Q8NGF9 303 aa10.33□□□□□ -0.76
CLK3-224ENST00000568605 OR8U1Q8NH10 309 aa10.33□□□□□ -0.76
CLK3-224ENST00000568605 GON7Q9BXV9 100 aa10.33□□□□□ -0.76
CLK3-224ENST00000568605 ADAM30Q9UKF2 790 aa10.33□□□□□ -0.76
CLK3-224ENST00000568605 IGKV1D-8A0A087WSZ0 117 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 FAM25AB3EWG3 89 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 FAM25CB3EWG5 89 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 FAM25GB3EWG6 89 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 ZNF736B4DX44 427 aaPredicted RBP10.32□□□□□ -0.76
CLK3-224ENST00000568605 M0R1X1 148 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 NBR2O15453 112 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 PLXNB1O43157 2135 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 SLC22A5O76082 557 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 EIF4EP06730 217 aaKnown RBP10.32□□□□□ -0.76
CLK3-224ENST00000568605 LUMP51884 338 aaPredicted RBP10.32□□□□□ -0.76
CLK3-224ENST00000568605 TAGLNQ01995 201 aaKnown RBP10.32□□□□□ -0.76
CLK3-224ENST00000568605 SRSF4Q08170 494 aaKnown RBP10.32□□□□□ -0.76
CLK3-224ENST00000568605 PRR31Q5SQ13 230 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 Q6ZS46 218 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 CENPVQ7Z7K6 275 aaPredicted RBP10.32□□□□□ -0.76
CLK3-224ENST00000568605 HOGA1Q86XE5 327 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 PDPNQ86YL7 162 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 CHPT1Q8WUD6 406 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 ADTRPQ96IZ2 230 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 WNT10AQ9GZT5 417 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 NECAP2Q9NVZ3 263 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 RNF150Q9ULK6 438 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 GAB2Q9UQC2 676 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 OR2W1Q9Y3N9 320 aa10.32□□□□□ -0.76
CLK3-224ENST00000568605 SH2D7A6NKC9 451 aaPredicted RBP10.31□□□□□ -0.76
CLK3-224ENST00000568605 H0YJW9 148 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 AP4M1O00189 453 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 IGHG2P01859 326 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 CT45A6P0DMU7 189 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 CT45A5P0DMU8 189 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 CT45A7P0DMV0 189 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 PRSS3P35030 304 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 THBS3P49746 956 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 KRTAP10-3P60369 221 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 SLC35B1P78383 322 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 RTL8BQ17RB0 113 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 GLDNQ6ZMI3 551 aaPredicted RBP10.31□□□□□ -0.76
CLK3-224ENST00000568605 FAM71E2Q8N5Q1 922 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 Q8N9W7 124 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 OR5AN1Q8NGI8 311 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 TSNAXQ99598 290 aaKnown RBP10.31□□□□□ -0.76
CLK3-224ENST00000568605 RNF5Q99942 180 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 SDHAF2Q9NX18 166 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 CCDC59Q9P031 241 aaKnown RBP10.31□□□□□ -0.76
CLK3-224ENST00000568605 WNK1Q9H4A3 2382 aa10.31□□□□□ -0.76
CLK3-224ENST00000568605 PSMB11A5LHX3 300 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 HPGDSO60760 199 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 SPDEFO95238 335 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 OPN1MWP04001 364 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 OPN1MW2P0DN77 364 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 OPN1MW3P0DN78 364 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 NFYAP23511 347 aaPredicted RBP10.3□□□□□ -0.76
CLK3-224ENST00000568605 TAS2R46P59540 309 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 PLGLAQ15195 96 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 ZNF645Q8N7E2 425 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 C11orf44Q8N8P7 122 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 OR5AU1Q8NGC0 362 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 C15orf40Q8WUR7 153 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 MMP27Q9H306 513 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 SCPEP1Q9HB40 452 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 SLC35D1Q9NTN3 355 aa10.3□□□□□ -0.76
CLK3-224ENST00000568605 ZNF107Q9UII5 783 aaPredicted RBP10.3□□□□□ -0.76
CLK3-224ENST00000568605 MEIS3P1A6NDR6 274 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 RGS5O15539 181 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 NDUFA3O95167 84 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 HLA-DRB1P01911 266 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 CSF1P09603 554 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 OR5H8P0DN80 308 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 RRASP10301 218 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 ELK1P19419 428 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 F2RL1P55085 397 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 SPCS2Q15005 226 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 C5orf64Q2M2E5 130 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 NDUFA11Q86Y39 141 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 COMMD1Q8N668 190 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 GVQW1Q8N7I0 195 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 DRAXINQ8NBI3 349 aaPredicted RBP10.29□□□□□ -0.76
CLK3-224ENST00000568605 NPBQ8NG41 125 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 OR5AP2Q8NGF4 316 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 WIPF2Q8TF74 440 aaPredicted RBP10.29□□□□□ -0.76
CLK3-224ENST00000568605 BORCS5Q969J3 196 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 PLSCR3Q9NRY6 295 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 EXTL2Q9UBQ6 330 aa10.29□□□□□ -0.76
CLK3-224ENST00000568605 MRPS7Q9Y2R9 242 aaKnown RBP10.29□□□□□ -0.76
CLK3-224ENST00000568605 CCDC160A6NGH7 325 aa10.28□□□□□ -0.76
CLK3-224ENST00000568605 H3BMQ9 156 aa10.28□□□□□ -0.76
CLK3-224ENST00000568605 SULT1C2O00338 296 aa10.28□□□□□ -0.76
CLK3-224ENST00000568605 TPPPO94811 219 aa10.28□□□□□ -0.76
CLK3-224ENST00000568605 HLA-DQB1P01920 261 aa10.28□□□□□ -0.76
CLK3-224ENST00000568605 PTHLHP12272 177 aa10.28□□□□□ -0.76
CLK3-224ENST00000568605 VDAC1P21796 283 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms