RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 LMO7DNF2Z398 122 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 H0Y980 276 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 ADMP35318 185 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 TFF3Q07654 80 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 TDRG1Q3Y452 100 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 ZNF738Q8NE65 137 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 C22orf15Q8WYQ4 148 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 TPPP3Q9BW30 176 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 RIMS4Q9H426 269 aaPredicted RBP9.32□□□□□ -0.92
PALB2-206ENST00000568219 B4E171 279 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 SRP14P37108 136 aaKnown RBP9.32□□□□□ -0.92
PALB2-206ENST00000568219 TSPAN7P41732 249 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 STUMQ69YW2 141 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 Q6ZVH6 145 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 GBGT1Q8N5D6 347 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 OR8G5Q8NG78 346 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 POC1BQ8TC44 478 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 NANOS1Q8WY41 292 aaKnown RBP9.32□□□□□ -0.92
PALB2-206ENST00000568219 ZDHHC16Q969W1 377 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 SLC35E1Q96K37 410 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 LPAR2Q9HBW0 351 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 FAM166BA8MTA8 275 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 FCGR3BO75015 233 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 UCP1P25874 307 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 GNG4P50150 75 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 ARL16Q0P5N6 197 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 SLC24A4Q8NFF2 622 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 OR4P4Q8NGL7 312 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 CDH20Q9HBT6 801 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 PSG11Q9UQ72 335 aa9.32□□□□□ -0.92
PALB2-206ENST00000568219 CNOT1A5YKK6 2376 aaKnown RBP9.32□□□□□ -0.92
PALB2-206ENST00000568219 NGFP01138 241 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 IFI6P09912 130 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 HOXC12P31275 282 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 BRS3P32247 399 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 ZNF573Q86YE8 665 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 OR5B3Q8NH48 314 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 A0A1B0GWJ7 208 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 CD27P26842 260 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 PAFAH1B2P68402 229 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 ATP6V1FQ16864 119 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 LRRC75BQ2VPJ9 315 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 FAM27BQ5VT28 67 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 Q6ZRM9 215 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 NHLRC2Q8NBF2 726 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 MRGPRDQ8TDS7 321 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 WDYHV1Q96HA8 205 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 SFRP2Q96HF1 295 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 AKIRIN1Q9H9L7 192 aaPredicted RBP9.31□□□□□ -0.92
PALB2-206ENST00000568219 ATP23Q9Y6H3 246 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 A0A1B0GW64 132 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 TMEM250H0YL14 139 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 CA11O75493 328 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 PFN1P07737 140 aaKnown RBP9.31□□□□□ -0.92
PALB2-206ENST00000568219 EXT1Q16394 746 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 RPEL1Q2QD12 228 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 UNQ5815/PRO19632Q6UWF5 114 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 TGIF2LYQ8IUE0 185 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 OIT3Q8WWZ8 545 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 GALMQ96C23 342 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 OR2H1Q9GZK4 316 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 TBL2Q9Y4P3 447 aaKnown RBP9.31□□□□□ -0.92
PALB2-206ENST00000568219 M0R2Z0 102 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 CDIPTO14735 213 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 C9orf50Q5SZB4 431 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 MIC13Q5XKP0 118 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 ABLIM2Q6H8Q1 611 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 LRTM2Q8N967 370 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 LRFN3Q9BTN0 628 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 UQCR10Q9UDW1 63 aa9.31□□□□□ -0.92
PALB2-206ENST00000568219 RANBP2P49792 3224 aaKnown RBP9.3□□□□□ -0.92
PALB2-206ENST00000568219 SRIP30626 198 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 UBE2NP61088 152 aaKnown RBP9.3□□□□□ -0.92
PALB2-206ENST00000568219 OR8B8Q15620 311 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 FBXO46Q6PJ61 603 aaPredicted RBP9.3□□□□□ -0.92
PALB2-206ENST00000568219 APOBEC3DQ96AK3 386 aaPredicted RBP9.3□□□□□ -0.92
PALB2-206ENST00000568219 TMEM56Q96MV1 263 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 TMEM242Q9NWH2 141 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 ABI3Q9P2A4 366 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 TMEM56-RWDD3S4R434 201 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 GLB1P16278 677 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 TRAT1Q6PIZ9 186 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 OR10D3Q8NH80 312 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 ABHD14BQ96IU4 210 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 CACNA1HO95180 2353 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 SPTBN1Q01082 2364 aaKnown RBP9.3□□□□□ -0.92
PALB2-206ENST00000568219 TICRRQ7Z2Z1 1910 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 CDKN1AP38936 164 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 RND2P52198 227 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 MRPL49Q13405 166 aaKnown RBP9.3□□□□□ -0.92
PALB2-206ENST00000568219 PSG5Q15238 335 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 VHLLQ6RSH7 139 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 LYPD6Q86Y78 171 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 DOLPP1Q86YN1 238 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 C10orf35Q96D05 121 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 TMEM38BQ9NVV0 291 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 TAAR3PQ9P1P4 343 aa9.3□□□□□ -0.92
PALB2-206ENST00000568219 IGKV3D-11A0A0A0MRZ8 115 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 PRR19A6NJB7 356 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 SH2D1BO14796 132 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms