RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PLEKHF2Q9H8W4 249 aa4.44□□□□□ -1.7
CAPN3-217ENST00000567817 TREM1Q9NP99 234 aa4.44□□□□□ -1.7
CAPN3-217ENST00000567817 ACKR4Q9NPB9 350 aa4.44□□□□□ -1.7
CAPN3-217ENST00000567817 OR2S2Q9NQN1 319 aa4.44□□□□□ -1.7
CAPN3-217ENST00000567817 LIN7CQ9NUP9 197 aaKnown RBP4.44□□□□□ -1.7
CAPN3-217ENST00000567817 FBXL17Q9UF56 701 aa4.44□□□□□ -1.7
CAPN3-217ENST00000567817 POLDIP2Q9Y2S7 368 aa4.44□□□□□ -1.7
CAPN3-217ENST00000567817 AMDHD2Q9Y303 409 aa4.44□□□□□ -1.7
CAPN3-217ENST00000567817 ZNF175Q9Y473 711 aa4.44□□□□□ -1.7
CAPN3-217ENST00000567817 ABCA4P78363 2273 aa4.44□□□□□ -1.7
CAPN3-217ENST00000567817 ACANP16112 2415 aa4.44□□□□□ -1.7
CAPN3-217ENST00000567817 IGKV1-27A0A075B6S5 117 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 C3orf85A0A1B0GTC6 90 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 C5orf63A6NC05 138 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 MSGN1A6NI15 193 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 A6NNC1 897 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 TRDCB7Z8K6 153 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 G3V3Y1 287 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 H0Y980 276 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 RNASEK-C17orf49H0YIS7 233 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 DEGS1O15121 323 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 PHF1O43189 567 aaPredicted RBP4.43□□□□□ -1.7
CAPN3-217ENST00000567817 SPRY1O43609 319 aaPredicted RBP4.43□□□□□ -1.7
CAPN3-217ENST00000567817 PITX3O75364 302 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 NEURL1O76050 574 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 DFFBO76075 338 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 NAPSAO96009 420 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 DANCRP0C864 163 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 SPP1P10451 314 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 SELEP16581 610 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 VDAC1P21796 283 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 UCP1P25874 307 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 APLNRP35414 380 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 CD200P41217 278 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 NKX2-1P43699 371 aaPredicted RBP4.43□□□□□ -1.7
CAPN3-217ENST00000567817 KCNJ3P48549 501 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 THBS3P49746 956 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 LHX2P50458 406 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 GNG3P63215 75 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 ARF1P84077 181 aaKnown RBP4.43□□□□□ -1.7
CAPN3-217ENST00000567817 TGFBR3Q03167 851 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 RBPJQ06330 500 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 Q0VFX4 171 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 IL24Q13007 206 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 OR1C1Q15619 314 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 TSC22D1Q15714 1073 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 MSMO1Q15800 293 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 ACSF3Q4G176 576 aaPredicted RBP4.43□□□□□ -1.7
CAPN3-217ENST00000567817 DCAF10Q5QP82 559 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 TSPO2Q5TGU0 170 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 ASPHD1Q5U4P2 390 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 RPL7L1Q6DKI1 246 aaKnown RBP4.43□□□□□ -1.7
CAPN3-217ENST00000567817 FIP1L1Q6UN15 594 aaKnown RBP4.43□□□□□ -1.7
CAPN3-217ENST00000567817 BTNL8Q6UX41 500 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 SLC25A26Q70HW3 274 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 RNF144BQ7Z419 303 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 PUSL1Q8N0Z8 303 aaKnown RBP4.43□□□□□ -1.7
CAPN3-217ENST00000567817 C15orf54Q8N8G6 183 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 OR56B2PQ8NGI1 322 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 OR5D13Q8NGL4 314 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 OR4D5Q8NGN0 318 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 OR4A4PQ8NGN8 299 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 LILRB1Q8NHL6 650 aaPredicted RBP4.43□□□□□ -1.7
CAPN3-217ENST00000567817 GLYATL2Q8WU03 294 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 ABHD3Q8WU67 409 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 ROBO4Q8WZ75 1007 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 SLAMF9Q96A28 289 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 MRPL24Q96A35 216 aaKnown RBP4.43□□□□□ -1.7
CAPN3-217ENST00000567817 THOC3Q96J01 351 aaKnown RBP4.43□□□□□ -1.7
CAPN3-217ENST00000567817 TTTY12Q9BZ98 90 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 TMEM222Q9H0R3 208 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 HRH4Q9H3N8 390 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 AAMDCQ9H7C9 122 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 Q9N2K0 584 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 SMCO4Q9NRQ5 59 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 MLXQ9UH92 298 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 RNF150Q9ULK6 438 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 PRELID3BQ9Y3B1 194 aa4.43□□□□□ -1.7
CAPN3-217ENST00000567817 LSM5Q9Y4Y9 91 aaKnown RBP4.43□□□□□ -1.7
CAPN3-217ENST00000567817 TNRC6AQ8NDV7 1962 aaKnown RBP4.43□□□□□ -1.7
CAPN3-217ENST00000567817 FLNAP21333 2647 aaKnown RBP4.42□□□□□ -1.7
CAPN3-217ENST00000567817 FER1L5A0AVI2 2057 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 IGKV1D-8A0A087WSZ0 117 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 IGKV1-12A0A0C4DH73 117 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 A0A0G2JMM0 328 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 A0A1W2PPB8 328 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 A0A1W2PRS3 328 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 TMEM210A6NLX4 147 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 CD300LBA8K4G0 201 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 RNF212BA8MTL3 300 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 KIR3DP1A8MWS1 328 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 J3QT63 122 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 NME2P1O60361 137 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 NDUFS6O75380 124 aaKnown RBP4.42□□□□□ -1.7
CAPN3-217ENST00000567817 CLDN14O95500 239 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 IGKV1D-12P01611 117 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 HBE1P02100 147 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 PRH1P02810 166 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 IFNA4P05014 189 aa4.42□□□□□ -1.7
CAPN3-217ENST00000567817 ACAA1P09110 424 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms