RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 C5orf56Q8N8D9 126 aa13.71□□□□□ -0.21
COMMD4-220ENST00000567720 GPX8Q8TED1 209 aa13.71□□□□□ -0.21
COMMD4-220ENST00000567720 DCUN1D5Q9BTE7 237 aa13.71□□□□□ -0.21
COMMD4-220ENST00000567720 IGKV1D-13A0A0B4J2D9 117 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 SMIM31A0A1B0GVY4 71 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 ZNF701M0R085 212 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-220ENST00000567720 TUSC2O75896 110 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 MOSP00540 346 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 CT45A6P0DMU7 189 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 CT45A5P0DMU8 189 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 CT45A7P0DMV0 189 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 IGKV1-13P0DP09 117 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 ABCA11PQ4W5N1 156 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-220ENST00000567720 OR2T10Q8NGZ9 312 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 OR2T6Q8NHC8 308 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 C6orf62Q9GZU0 229 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-220ENST00000567720 NXF2Q9GZY0 626 aaKnown RBP13.7□□□□□ -0.22
COMMD4-220ENST00000567720 GHITMQ9H3K2 345 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 SDHAF2Q9NX18 166 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 ZNF221Q9UK13 617 aa13.7□□□□□ -0.22
COMMD4-220ENST00000567720 H0YJW9 148 aa13.69□□□□□ -0.22
COMMD4-220ENST00000567720 NAT1P18440 290 aa13.69□□□□□ -0.22
COMMD4-220ENST00000567720 LINC00205P59089 165 aa13.69□□□□□ -0.22
COMMD4-220ENST00000567720 KRTAP10-3P60369 221 aa13.69□□□□□ -0.22
COMMD4-220ENST00000567720 RNASE12Q5GAN4 147 aaKnown RBP13.69□□□□□ -0.22
COMMD4-220ENST00000567720 C11orf88Q6PI97 169 aa13.69□□□□□ -0.22
COMMD4-220ENST00000567720 C3orf56Q8N813 242 aa13.69□□□□□ -0.22
COMMD4-220ENST00000567720 DRAXINQ8NBI3 349 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-220ENST00000567720 ZNF747Q9BV97 191 aa13.69□□□□□ -0.22
COMMD4-220ENST00000567720 PRSS22Q9GZN4 317 aa13.69□□□□□ -0.22
COMMD4-220ENST00000567720 SCPEP1Q9HB40 452 aa13.69□□□□□ -0.22
COMMD4-220ENST00000567720 SERTAD4Q9NUC0 356 aa13.69□□□□□ -0.22
COMMD4-220ENST00000567720 NECAP2Q9NVZ3 263 aa13.69□□□□□ -0.22
COMMD4-220ENST00000567720 OR2W1Q9Y3N9 320 aa13.69□□□□□ -0.22
COMMD4-220ENST00000567720 TRRAPQ9Y4A5 3859 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 OR5H14A6NHG9 310 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 J3QRK9 145 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 M0QZK8 103 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 M0R1X1 148 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 FGF16O43320 207 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 SRSF4Q08170 494 aaKnown RBP13.68□□□□□ -0.22
COMMD4-220ENST00000567720 CDK10Q15131 360 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 FOXB2Q5VYV0 432 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 ZNF383Q8NA42 475 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 OR5AP2Q8NGF4 316 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 OR5AN1Q8NGI8 311 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 MCFD2Q8NI22 146 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 ABHD1Q96SE0 405 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 PLSCR3Q9NRY6 295 aa13.68□□□□□ -0.22
COMMD4-220ENST00000567720 RBM7Q9Y580 266 aaKnown RBP13.68□□□□□ -0.22
COMMD4-220ENST00000567720 TET2Q6N021 2002 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-220ENST00000567720 PLXNB1O43157 2135 aa13.67□□□□□ -0.22
COMMD4-220ENST00000567720 IGLV2-14P01704 120 aa13.67□□□□□ -0.22
COMMD4-220ENST00000567720 OR5H8P0DN80 308 aa13.67□□□□□ -0.22
COMMD4-220ENST00000567720 AADACP22760 399 aa13.67□□□□□ -0.22
COMMD4-220ENST00000567720 CNTFRP26992 372 aa13.67□□□□□ -0.22
COMMD4-220ENST00000567720 FAM71E2Q8N5Q1 922 aa13.67□□□□□ -0.22
COMMD4-220ENST00000567720 KLHDC1Q8N7A1 406 aa13.67□□□□□ -0.22
COMMD4-220ENST00000567720 Q8N9W7 124 aa13.67□□□□□ -0.22
COMMD4-220ENST00000567720 RITA1Q96K30 269 aa13.67□□□□□ -0.22
COMMD4-220ENST00000567720 GAB2Q9UQC2 676 aa13.67□□□□□ -0.22
COMMD4-220ENST00000567720 VWFP04275 2813 aa13.66□□□□□ -0.22
COMMD4-220ENST00000567720 HAX1O00165 279 aa13.66□□□□□ -0.22
COMMD4-220ENST00000567720 SULT1C2O00338 296 aa13.66□□□□□ -0.22
COMMD4-220ENST00000567720 FCGR2CP31995 323 aa13.66□□□□□ -0.22
COMMD4-220ENST00000567720 RCVRNP35243 200 aa13.66□□□□□ -0.22
COMMD4-220ENST00000567720 VDAC2P45880 294 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-220ENST00000567720 LUMP51884 338 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-220ENST00000567720 F2RL1P55085 397 aa13.66□□□□□ -0.22
COMMD4-220ENST00000567720 ACTBP60709 375 aa13.66□□□□□ -0.22
COMMD4-220ENST00000567720 MMDQ15546 238 aa13.66□□□□□ -0.22
COMMD4-220ENST00000567720 ZNF645Q8N7E2 425 aa13.66□□□□□ -0.22
COMMD4-220ENST00000567720 OR52I2Q8NH67 350 aa13.66□□□□□ -0.22
COMMD4-220ENST00000567720 EHFQ9NZC4 300 aa13.66□□□□□ -0.22
COMMD4-220ENST00000567720 WASHC3Q9Y3C0 194 aa13.66□□□□□ -0.22
COMMD4-220ENST00000567720 CMYA5Q8N3K9 4069 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 DPPA5A6NC42 116 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 NCBP2LA6PVI3 153 aaKnown RBP13.65□□□□□ -0.22
COMMD4-220ENST00000567720 TPPPO94811 219 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 PPYP01298 95 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 PMP2P02689 132 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 IGKV1-16P04430 117 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 HLA-DMAP28067 261 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 HRH1P35367 487 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 RFX2P48378 723 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 TAS2R46P59540 309 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 DGCR2P98153 550 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 ARSJQ5FYB0 599 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-220ENST00000567720 C9orf152Q5JTZ5 239 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 ZNF660Q6AZW8 331 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-220ENST00000567720 OVCH2Q7RTZ1 564 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 LYSMD2Q8IV50 215 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 OR8H1Q8NGG4 311 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 OR5H2Q8NGV7 314 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 DIRAS2Q96HU8 199 aa13.65□□□□□ -0.22
COMMD4-220ENST00000567720 LINC00473A8K010 186 aa13.64□□□□□ -0.23
COMMD4-220ENST00000567720 H7C2Y5 167 aa13.64□□□□□ -0.23
COMMD4-220ENST00000567720 APOA2P02652 100 aa13.64□□□□□ -0.23
COMMD4-220ENST00000567720 DUTP33316 252 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms