RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 PPP1CCP36873 323 aaKnown RBP4.72□□□□□ -1.65
SF3B3-210ENST00000567654 CEACAM6P40199 344 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 P2RX3P56373 397 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 LINC00205P59089 165 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 RND3P61587 244 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 RPL30P62888 115 aaKnown RBP4.72□□□□□ -1.65
SF3B3-210ENST00000567654 PAX5Q02548 391 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 EIF4EBP1Q13541 118 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-210ENST00000567654 RAB32Q13637 225 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 OPCMLQ14982 345 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 ABCA11PQ4W5N1 156 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 C11orf71Q6IPW1 123 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 C11orf87Q6NUJ2 197 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 LPCAT3Q6P1A2 487 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 GSG1LQ6UXU4 331 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 MEX3BQ6ZN04 569 aaKnown RBP4.72□□□□□ -1.65
SF3B3-210ENST00000567654 SSX8Q7RTT4 187 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 SELENOHQ8IZQ5 122 aaKnown RBP4.72□□□□□ -1.65
SF3B3-210ENST00000567654 SLC35G3Q8N808 338 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 OR10V1Q8NGI7 309 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 OR8U1Q8NH10 309 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 OR10J5Q8NHC4 309 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 COQ8AQ8NI60 647 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 ARL11Q969Q4 196 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 RRNAD1Q96FB5 475 aaKnown RBP4.72□□□□□ -1.65
SF3B3-210ENST00000567654 PDCD10Q9BUL8 212 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 RNF126Q9BV68 326 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 NMES1Q9C002 83 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 TOLLIPQ9H0E2 274 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 SLA2Q9H6Q3 261 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 SAP30LQ9HAJ7 183 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 RAB18Q9NP72 206 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 DYNLRB1Q9NP97 96 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 TMEM106BQ9NUM4 274 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 OR5AC2Q9NZP5 309 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 MBD2Q9UBB5 411 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 NDRG3Q9UGV2 375 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 RNF150Q9ULK6 438 aa4.72□□□□□ -1.65
SF3B3-210ENST00000567654 HMSDA8MTL9 139 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 B9A039 149 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 H7C1Q1 480 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 L7N2F9 121 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 LGALS8O00214 317 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 SIGLEC5O15389 551 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 PROP1O75360 226 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 C1QL1O75973 258 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 IGHV3-7P01780 117 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 SOD3P08294 240 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 SLC25A4P12235 298 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 UCP1P25874 307 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 LUMP51884 338 aaPredicted RBP4.71□□□□□ -1.66
SF3B3-210ENST00000567654 EDDM3BP56851 147 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 LOXL3P58215 753 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 BRWD1-AS2P59051 145 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 HABP2Q14520 560 aaPredicted RBP4.71□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF273Q14593 569 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 IZUMO4Q1ZYL8 232 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 TMEM268Q5VZI3 342 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 BTNL3Q6UXE8 466 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 TMUB2Q71RG4 321 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 SLC7A5P1Q8MH63 180 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 MUC15Q8N387 334 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF561Q8N587 486 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 DRAM1Q8N682 238 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 LRTM2Q8N967 370 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF565Q8N9K5 539 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 CCDC71LQ8N9Z2 235 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 OR52M1Q8NGK5 317 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 OR51H1Q8NH63 302 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 PCNPQ8WW12 178 aaKnown RBP4.71□□□□□ -1.66
SF3B3-210ENST00000567654 CCL17Q92583 94 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 LEAP2Q969E1 77 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 ERGIC1Q969X5 290 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 C14orf79Q96F83 325 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 ABHD14BQ96IU4 210 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 LURAP1Q96LR2 239 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 C2orf50Q96LR7 162 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 SUCNR1Q9BXA5 334 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 TMEM222Q9H0R3 208 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 DNTTIP1Q9H147 329 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 OR2D2Q9H210 308 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF665Q9H7R5 613 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 METTL8Q9H825 291 aaKnown RBP4.71□□□□□ -1.66
SF3B3-210ENST00000567654 UNKLQ9H9P5 680 aaKnown RBP4.71□□□□□ -1.66
SF3B3-210ENST00000567654 C19orf12Q9NSK7 152 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 ZNRD1Q9P1U0 126 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 KCNS2Q9ULS6 477 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 TNFSF18Q9UNG2 199 aa4.71□□□□□ -1.66
SF3B3-210ENST00000567654 PLXNB1O43157 2135 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 PPIAL4EA0A075B759 164 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 A0A1W2PPE3 182 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 PPIAL4DF5H284 164 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 H0Y980 276 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 HSPA12AO43301 675 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 ATP6V1G1O75348 118 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 RP2O75695 350 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 NXPH3O95157 252 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 CDS2O95674 445 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 DANCRP0C864 163 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms