RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 CEACAM6P40199 344 aa11.68□□□□□ -0.54
SCAMP2-209ENST00000567638 INSL3P51460 131 aa11.68□□□□□ -0.54
SCAMP2-209ENST00000567638 TMEM50BP56557 158 aa11.68□□□□□ -0.54
SCAMP2-209ENST00000567638 CX3CL1P78423 397 aa11.68□□□□□ -0.54
SCAMP2-209ENST00000567638 PLGLAQ15195 96 aa11.68□□□□□ -0.54
SCAMP2-209ENST00000567638 TCTEX1D1Q8N7M0 179 aa11.68□□□□□ -0.54
SCAMP2-209ENST00000567638 ARHGAP5-AS1Q96IT6 56 aa11.68□□□□□ -0.54
SCAMP2-209ENST00000567638 FOXA2Q9Y261 457 aaPredicted RBP11.68□□□□□ -0.54
SCAMP2-209ENST00000567638 ZNF256Q9Y2P7 627 aaPredicted RBP11.68□□□□□ -0.54
SCAMP2-209ENST00000567638 NHLRC4P0CG21 123 aaPredicted RBP11.67□□□□□ -0.54
SCAMP2-209ENST00000567638 CALRP27797 417 aaKnown RBP11.67□□□□□ -0.54
SCAMP2-209ENST00000567638 VEGFCP49767 419 aa11.67□□□□□ -0.54
SCAMP2-209ENST00000567638 CLDN12P56749 244 aa11.67□□□□□ -0.54
SCAMP2-209ENST00000567638 FABP5Q01469 135 aa11.67□□□□□ -0.54
SCAMP2-209ENST00000567638 ABHD5Q8WTS1 349 aa11.67□□□□□ -0.54
SCAMP2-209ENST00000567638 PTX4Q96A99 478 aa11.67□□□□□ -0.54
SCAMP2-209ENST00000567638 RNF5Q99942 180 aa11.67□□□□□ -0.54
SCAMP2-209ENST00000567638 CMSS1Q9BQ75 279 aaKnown RBP11.67□□□□□ -0.54
SCAMP2-209ENST00000567638 PECRQ9BY49 303 aa11.67□□□□□ -0.54
SCAMP2-209ENST00000567638 CCDC90BQ9GZT6 254 aa11.67□□□□□ -0.54
SCAMP2-209ENST00000567638 NUBP2Q9Y5Y2 271 aa11.67□□□□□ -0.54
SCAMP2-209ENST00000567638 A3GALT2U3KPV4 340 aa11.67□□□□□ -0.54
SCAMP2-209ENST00000567638 FCN1O00602 326 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 OVOL1O14753 267 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 PROP1O75360 226 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 EGR2P11161 476 aaPredicted RBP11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 CRHBPP24387 322 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 PLAC9Q5JTB6 97 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 CD200R1LQ6Q8B3 271 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 PRSS48Q7RTY5 328 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 DRAXINQ8NBI3 349 aaPredicted RBP11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 OR56B1Q8NGI3 324 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 CASTOR1Q8WTX7 329 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 DCUN1D4Q92564 292 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 FAM3DQ96BQ1 224 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 MGLLQ99685 303 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 ALX4Q9H161 411 aaPredicted RBP11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 METTL1Q9UBP6 276 aaKnown RBP11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 RNF150Q9ULK6 438 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 GAB2Q9UQC2 676 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 V9GY05 133 aa11.66□□□□□ -0.54
SCAMP2-209ENST00000567638 IGKV1-6A0A0C4DH72 117 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 LDLRAD4O15165 306 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 SPDEFO95238 335 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 LGALS1P09382 135 aaKnown RBP11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 RANBP1P43487 201 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 TMEM267Q0VDI3 215 aaPredicted RBP11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 PSG5Q15238 335 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 C2orf76Q3KRA6 126 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 PYHIN1Q6K0P9 492 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 ZNF429Q86V71 674 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 PPP1R27Q86WC6 154 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 ZNF383Q8NA42 475 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 CLCC1Q96S66 551 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 FAM103A1Q9BTL3 118 aaKnown RBP11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 TOLLIPQ9H0E2 274 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 ACOT13Q9NPJ3 140 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 RDH8Q9NYR8 311 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 ZNF221Q9UK13 617 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 U3KQK5 164 aa11.65□□□□□ -0.54
SCAMP2-209ENST00000567638 DNAH9Q9NYC9 4486 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 TRDCB7Z8K6 153 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 LINC01619G3V211 115 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 DENRO43583 198 aaKnown RBP11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 LY86O95711 162 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 CA2P00918 260 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 APOA2P02652 100 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 IGKV1-16P04430 117 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 TFAP2AP05549 437 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 MAP2K4P45985 399 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 PSMD7P51665 324 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 SLURP1P55000 103 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 PLA2G7Q13093 441 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 AKIRIN2Q53H80 203 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 ACTBL2Q562R1 376 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 HES5Q5TA89 166 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 UNQ5815/PRO19632Q6UWF5 114 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 ZNF562Q6V9R5 426 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 PDPNQ86YL7 162 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 DLX4Q92988 240 aaPredicted RBP11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 TSNAXQ99598 290 aaKnown RBP11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 TPSG1Q9NRR2 321 aa11.64□□□□□ -0.55
SCAMP2-209ENST00000567638 IGHV4OR15-8A0A075B7B6 117 aa11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 A0A087WW49 117 aa11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 TMEM272A0A1B0GTI8 110 aa11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 SAP30O75446 220 aa11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 SNRPBP14678 240 aaKnown RBP11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 SERPINB10P48595 397 aa11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 LINC00205P59089 165 aa11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 RPS16P62249 146 aaKnown RBP11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 TBCEQ15813 527 aaPredicted RBP11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 LFNGQ8NES3 379 aa11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 OR4A4PQ8NGN8 299 aa11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 RAB22AQ9UL26 194 aa11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 KCNK7Q9Y2U2 307 aa11.63□□□□□ -0.55
SCAMP2-209ENST00000567638 M0R1X1 148 aa11.62□□□□□ -0.55
SCAMP2-209ENST00000567638 FABP7O15540 132 aa11.62□□□□□ -0.55
SCAMP2-209ENST00000567638 IGHV3-11P01762 117 aa11.62□□□□□ -0.55
SCAMP2-209ENST00000567638 FCGR3AP08637 254 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms