RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 MBD3L4A6NDZ8 208 aaPredicted RBP7.81□□□□□ -1.16
BBS4-210ENST00000566400 MBD3L3A6NE82 208 aaPredicted RBP7.81□□□□□ -1.16
BBS4-210ENST00000566400 MBD3L5A6NJ08 208 aaPredicted RBP7.81□□□□□ -1.16
BBS4-210ENST00000566400 OR5H1A6NKK0 313 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 CLDN34H7C241 214 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 ITGB1BP1O14713 200 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 MGST3O14880 152 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 NKX2-8O15522 239 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 RBFOX2O43251 390 aaKnown RBP eCLIP7.81□□□□□ -1.16
BBS4-210ENST00000566400 MPDU1O75352 247 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 PTBP3O95758 552 aaKnown RBP7.81□□□□□ -1.16
BBS4-210ENST00000566400 CYB5R3P00387 301 aaPredicted RBP7.81□□□□□ -1.16
BBS4-210ENST00000566400 IGHV2-5P01817 119 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 ARG1P05089 322 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 FTH1P19P0C7X4 201 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 PSMB3P49720 205 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 CEBPGP53567 150 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 GNB2P62879 340 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 COL10A1Q03692 680 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 AESQ08117 197 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 CR1LQ2VPA4 569 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 ALKBH6Q3KRA9 238 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 VASH2Q86V25 355 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 C9orf106Q8NAJ2 232 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 MBD3L2Q8NHZ7 208 aaPredicted RBP7.81□□□□□ -1.16
BBS4-210ENST00000566400 COQ2Q96H96 371 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 RCC1LQ96I51 464 aaKnown RBP7.81□□□□□ -1.16
BBS4-210ENST00000566400 SNX22Q96L94 193 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 YPEL4Q96NS1 127 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 AGMATQ9BSE5 352 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 ASCL3Q9NQ33 180 aa7.81□□□□□ -1.16
BBS4-210ENST00000566400 ZNF71Q9NQZ8 489 aaPredicted RBP7.81□□□□□ -1.16
BBS4-210ENST00000566400 IGHV2OR16-5A0A0B4J2B6 119 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 UBE2L5PA0A1B0GUS4 154 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 ODAMA1E959 279 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 ZFP92A6NM28 416 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 TMEM250H0YL14 139 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 YPEL1O60688 119 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 EIF3GO75821 320 aaKnown RBP eCLIP7.8□□□□□ -1.16
BBS4-210ENST00000566400 CEACAM4O75871 244 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 HPRT1P00492 218 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 KRASP01116 189 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 DAOP14920 347 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 RPS10P46783 165 aaKnown RBP7.8□□□□□ -1.16
BBS4-210ENST00000566400 RAB11AP62491 216 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 FABP9Q0Z7S8 132 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 VWC2Q2TAL6 325 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 TMEM30BQ3MIR4 351 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 VWA1Q6PCB0 445 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 OR52L2PQ8NGH6 319 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 MRGPRDQ8TDS7 321 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 LHX4Q969G2 390 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 YPEL2Q96QA6 119 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 GGACTQ9BVM4 153 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 ACTR3CQ9C0K3 210 aaPredicted RBP7.8□□□□□ -1.16
BBS4-210ENST00000566400 GAB2Q9UQC2 676 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 hCG_1809904A0A1W2PP81 198 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 A0A1W2PR64 198 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 A0A1W2PRV1 198 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 SRRM5B3KS81 715 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 CYB5BO43169 146 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 RBMXL2O75526 392 aaKnown RBP7.8□□□□□ -1.16
BBS4-210ENST00000566400 OPN1MWP04001 364 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 OPN1MW2P0DN77 364 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 OPN1MW3P0DN78 364 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 PRDX2P32119 198 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 G6PCP35575 357 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 RAB7AP51149 207 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 FABP6P51161 128 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 ERVK-16P61578 105 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 ELOBQ15370 118 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 IZUMO4Q1ZYL8 232 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 AARDQ4LEZ3 155 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 TIMM23BQ5SRD1 257 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 LCN15Q6UWW0 184 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 HAPLN4Q86UW8 402 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 CXorf67Q86X51 503 aaPredicted RBP7.8□□□□□ -1.16
BBS4-210ENST00000566400 C1orf87Q8N0U7 546 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 OR52E5Q8NH55 327 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 LRRC29Q8WV35 223 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 TMPRSS5Q9H3S3 457 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 KCNIP2Q9NS61 270 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 OR6C3Q9NZP0 311 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 MYO15AQ9UKN7 3530 aa7.8□□□□□ -1.16
BBS4-210ENST00000566400 FREM1Q5H8C1 2179 aa7.79□□□□□ -1.16
BBS4-210ENST00000566400 IGHV1-18A0A0C4DH31 117 aa7.79□□□□□ -1.16
BBS4-210ENST00000566400 CEBPZOSA8MTT3 80 aa7.79□□□□□ -1.16
BBS4-210ENST00000566400 ZNF737O75373 536 aa7.79□□□□□ -1.16
BBS4-210ENST00000566400 AGFG2O95081 481 aa7.79□□□□□ -1.16
BBS4-210ENST00000566400 S1PR2O95136 353 aa7.79□□□□□ -1.16
BBS4-210ENST00000566400 CGAP01215 116 aa7.79□□□□□ -1.16
BBS4-210ENST00000566400 GPR12P47775 334 aa7.79□□□□□ -1.16
BBS4-210ENST00000566400 RND2P52198 227 aa7.79□□□□□ -1.16
BBS4-210ENST00000566400 SELENOVP59797 346 aa7.79□□□□□ -1.16
BBS4-210ENST00000566400 ARL16Q0P5N6 197 aa7.79□□□□□ -1.16
BBS4-210ENST00000566400 ZNF816Q0VGE8 651 aaPredicted RBP7.79□□□□□ -1.16
BBS4-210ENST00000566400 ACOT6Q3I5F7 207 aaPredicted RBP7.79□□□□□ -1.16
BBS4-210ENST00000566400 FAM90A2PQ658T7 463 aa7.79□□□□□ -1.16
BBS4-210ENST00000566400 OR8G2PQ6IF36 304 aa7.79□□□□□ -1.16
BBS4-210ENST00000566400 IGFL3Q6UXB1 125 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms