RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 TOLLIPQ9H0E2 274 aa6.92□□□□□ -1.3
VPS9D1-205ENST00000565452 RIMS4Q9H426 269 aaPredicted RBP6.92□□□□□ -1.3
VPS9D1-205ENST00000565452 RAB9BQ9NP90 201 aa6.92□□□□□ -1.3
VPS9D1-205ENST00000565452 RCC2Q9P258 522 aaKnown RBP6.92□□□□□ -1.3
VPS9D1-205ENST00000565452 HSF4Q9ULV5 492 aa6.92□□□□□ -1.3
VPS9D1-205ENST00000565452 SPATA2Q9UM82 520 aa6.92□□□□□ -1.3
VPS9D1-205ENST00000565452 MUC4Q99102 2169 aa6.92□□□□□ -1.3
VPS9D1-205ENST00000565452 TRAV24A0A0B4J272 114 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 TMEM272A0A1B0GTI8 110 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 ZNF729A6NN14 1252 aaPredicted RBP6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 PDCD6O75340 191 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 IGLV1-40P01703 118 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 BLVRBP30043 206 aaPredicted RBP6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 PPIFP30405 207 aaKnown RBP6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 OR3A1P47881 315 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 SERPINB10P48595 397 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 OR10A3P58181 314 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 VBP1P61758 197 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 LSM3P62310 102 aaKnown RBP6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 AESQ08117 197 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 UNC119Q13432 240 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 P2RY14Q15391 338 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 PIGYQ3MUY2 71 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 PAN3Q58A45 887 aaKnown RBP6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 ATAD3CQ5T2N8 411 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 MZT2AQ6P582 158 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 ZNF554Q86TJ5 538 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 NR2C2APQ86WQ0 139 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 SUMF2Q8NBJ7 301 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 TMEM104Q8NE00 496 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 OR10X1Q8NGY0 326 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 AP3S1Q92572 193 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 DPCDQ9BVM2 203 aaPredicted RBP6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 ALX4Q9H161 411 aaPredicted RBP6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 LPAR5Q9H1C0 372 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 DCSTAMPQ9H295 470 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 BANF2Q9H503 90 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 RNF167Q9H6Y7 350 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 PLSCR3Q9NRY6 295 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 PLEKHJ1Q9NW61 149 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 OR6C3Q9NZP0 311 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 IL36RNQ9UBH0 155 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 DAPK2Q9UIK4 370 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 PEX16Q9Y5Y5 336 aa6.91□□□□□ -1.3
VPS9D1-205ENST00000565452 SMIM31A0A1B0GVY4 71 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 A0A1W2PP11 408 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 SIRPB1O00241 398 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 RGS11O94810 467 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 MOSP00540 346 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 ZNF182P17025 639 aaPredicted RBP6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 SNU13P55769 128 aaKnown RBP6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 CLDN12P56749 244 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 NCS1P62166 190 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 DIAPH2-AS1Q14236 149 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 KRBOX4Q5JUW0 171 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 IDNKQ5T6J7 187 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 TRAT1Q6PIZ9 186 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 GAPTQ8N292 157 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 Q8N6K4 173 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 OR10A7Q8NGE5 316 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 FAM46BQ96A09 425 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 DGCR14Q96DF8 476 aaKnown RBP6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 S100A16Q96FQ6 103 aaKnown RBP6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 HSPB9Q9BQS6 159 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 DIABLOQ9NR28 239 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 SIGLEC8Q9NYZ4 499 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 ZNF107Q9UII5 783 aaPredicted RBP6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 MGAT4AQ9UM21 535 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 PSG11Q9UQ72 335 aa6.9□□□□□ -1.3
VPS9D1-205ENST00000565452 IGHV4OR15-8A0A075B7B6 117 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 A0A087WW49 117 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 IGHV3-72A0A0B4J1Y9 119 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 IGHV1-3A0A0C4DH29 117 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 KBTBD11-OT1A0A1B0GTJ5 212 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 ODAMA1E959 279 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 ORC5O43913 435 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 TPPPO94811 219 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 LGALS1P09382 135 aaKnown RBP6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 CLEC2LP0C7M8 214 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 SLC2A2P11168 524 aaPredicted RBP6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 CD1BP29016 333 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 TMEM50BP56557 158 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 ZNF816Q0VGE8 651 aaPredicted RBP6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 TMEM30BQ3MIR4 351 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 SIGIRRQ6IA17 410 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 OR10K2Q6IF99 312 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 ZNF497Q6ZNH5 498 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 IZUMO1Q8IYV9 350 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 OR10R2Q8NGX6 335 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 NEK7Q8TDX7 302 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 KIRREL1Q96J84 757 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 NAA50Q9GZZ1 169 aaKnown RBP6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 LINC00574Q9H8X3 128 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 TPSG1Q9NRR2 321 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 ING3Q9NXR8 418 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 RABL2AQ9UBK7 228 aaPredicted RBP6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 RABL2BQ9UNT1 228 aa6.89□□□□□ -1.31
VPS9D1-205ENST00000565452 TRBV6-6A0A0A6YYG2 114 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 TRAV41A0A0B4J266 112 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 TMEM30CPA0ZSE6 113 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms