RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 OR8U1Q8NH10 309 aa20.9■□□□□ 0.94
NME3-208ENST00000565379 OR5R1Q8NH85 324 aa20.9■□□□□ 0.94
NME3-208ENST00000565379 ABCB10Q9NRK6 738 aa20.9■□□□□ 0.94
NME3-208ENST00000565379 POMT1Q9Y6A1 747 aa20.9■□□□□ 0.94
NME3-208ENST00000565379 ANKRD20A5PA0PJZ0 165 aa20.89■□□□□ 0.93
NME3-208ENST00000565379 BTBD17A6NE02 478 aa20.89■□□□□ 0.93
NME3-208ENST00000565379 PPYP01298 95 aa20.89■□□□□ 0.93
NME3-208ENST00000565379 CD3DP04234 171 aa20.89■□□□□ 0.93
NME3-208ENST00000565379 HKR1P10072 659 aa20.89■□□□□ 0.93
NME3-208ENST00000565379 MSMO1Q15800 293 aa20.89■□□□□ 0.93
NME3-208ENST00000565379 ZNF833PQ6ZTB9 187 aa20.89■□□□□ 0.93
NME3-208ENST00000565379 TGIF2LXQ8IUE1 241 aa20.89■□□□□ 0.93
NME3-208ENST00000565379 DYNAPQ8N1N2 210 aa20.89■□□□□ 0.93
NME3-208ENST00000565379 MFSD4AQ8N468 514 aa20.89■□□□□ 0.93
NME3-208ENST00000565379 RTN4IP1Q8WWV3 396 aaPredicted RBP20.89■□□□□ 0.93
NME3-208ENST00000565379 BORCS5Q969J3 196 aa20.89■□□□□ 0.93
NME3-208ENST00000565379 WDR12Q9GZL7 423 aaKnown RBP20.89■□□□□ 0.93
NME3-208ENST00000565379 TNFRSF19Q9NS68 423 aa20.89■□□□□ 0.93
NME3-208ENST00000565379 PKD1L1Q8TDX9 2849 aa20.88■□□□□ 0.93
NME3-208ENST00000565379 SAA2-SAA4A0A096LPE2 208 aa20.88■□□□□ 0.93
NME3-208ENST00000565379 RAB3DO95716 219 aa20.88■□□□□ 0.93
NME3-208ENST00000565379 RNASE1P07998 156 aaKnown RBP20.88■□□□□ 0.93
NME3-208ENST00000565379 AKAIN1P0CW23 69 aa20.88■□□□□ 0.93
NME3-208ENST00000565379 SAA2P0DJI9 122 aaPredicted RBP20.88■□□□□ 0.93
NME3-208ENST00000565379 IER3P46695 156 aa20.88■□□□□ 0.93
NME3-208ENST00000565379 HERV-K104P61576 105 aa20.88■□□□□ 0.93
NME3-208ENST00000565379 ZNF660Q6AZW8 331 aaPredicted RBP20.88■□□□□ 0.93
NME3-208ENST00000565379 TRIM63Q969Q1 353 aa20.88■□□□□ 0.93
NME3-208ENST00000565379 SSX3Q99909 188 aa20.88■□□□□ 0.93
NME3-208ENST00000565379 ZNF2Q9BSG1 426 aaPredicted RBP20.88■□□□□ 0.93
NME3-208ENST00000565379 OR2D2Q9H210 308 aa20.88■□□□□ 0.93
NME3-208ENST00000565379 TRRAPQ9Y4A5 3859 aa20.88■□□□□ 0.93
NME3-208ENST00000565379 CLDN34H7C241 214 aa20.87■□□□□ 0.93
NME3-208ENST00000565379 WIPF1O43516 503 aa20.87■□□□□ 0.93
NME3-208ENST00000565379 AADACP22760 399 aa20.87■□□□□ 0.93
NME3-208ENST00000565379 FAUP35544 74 aaKnown RBP20.87■□□□□ 0.93
NME3-208ENST00000565379 TRIQKQ629K1 86 aa20.87■□□□□ 0.93
NME3-208ENST00000565379 TOMM5Q8N4H5 51 aa20.87■□□□□ 0.93
NME3-208ENST00000565379 ZNF645Q8N7E2 425 aa20.87■□□□□ 0.93
NME3-208ENST00000565379 ABHD14BQ96IU4 210 aa20.87■□□□□ 0.93
NME3-208ENST00000565379 RNF150Q9ULK6 438 aa20.87■□□□□ 0.93
NME3-208ENST00000565379 IGHV1-3A0A0C4DH29 117 aa20.86■□□□□ 0.93
NME3-208ENST00000565379 HOXA3O43365 443 aaPredicted RBP20.86■□□□□ 0.93
NME3-208ENST00000565379 CD40LGP29965 261 aa20.86■□□□□ 0.93
NME3-208ENST00000565379 INPP1P49441 399 aa20.86■□□□□ 0.93
NME3-208ENST00000565379 MOB3AQ96BX8 217 aa20.86■□□□□ 0.93
NME3-208ENST00000565379 CCDC32Q9BV29 185 aa20.86■□□□□ 0.93
NME3-208ENST00000565379 A0A1W2PPI3 338 aa20.85■□□□□ 0.93
NME3-208ENST00000565379 DISC1C4P0D8 188 aa20.85■□□□□ 0.93
NME3-208ENST00000565379 M0QYG6 137 aa20.85■□□□□ 0.93
NME3-208ENST00000565379 PPP5CP53041 499 aa20.85■□□□□ 0.93
NME3-208ENST00000565379 HABP2Q14520 560 aaPredicted RBP20.85■□□□□ 0.93
NME3-208ENST00000565379 ZNF846Q147U1 533 aa20.85■□□□□ 0.93
NME3-208ENST00000565379 LPCAT3Q6P1A2 487 aa20.85■□□□□ 0.93
NME3-208ENST00000565379 THNSL2Q86YJ6 484 aa20.85■□□□□ 0.93
NME3-208ENST00000565379 ZBTB34Q8NCN2 500 aa20.85■□□□□ 0.93
NME3-208ENST00000565379 ZNF251Q9BRH9 671 aa20.85■□□□□ 0.93
NME3-208ENST00000565379 TINAGL1Q9GZM7 467 aaPredicted RBP20.85■□□□□ 0.93
NME3-208ENST00000565379 PITPNC1Q9UKF7 332 aa20.85■□□□□ 0.93
NME3-208ENST00000565379 DIAPH2-AS1Q14236 149 aa20.84■□□□□ 0.93
NME3-208ENST00000565379 MOB3BQ86TA1 216 aa20.84■□□□□ 0.93
NME3-208ENST00000565379 AKR1E2Q96JD6 320 aa20.84■□□□□ 0.93
NME3-208ENST00000565379 SDHAF2Q9NX18 166 aa20.84■□□□□ 0.93
NME3-208ENST00000565379 H3BUX3 64 aa20.83■□□□□ 0.93
NME3-208ENST00000565379 FAM106CPP0CH98 169 aa20.83■□□□□ 0.93
NME3-208ENST00000565379 CD1BP29016 333 aa20.83■□□□□ 0.93
NME3-208ENST00000565379 REG1BP48304 166 aa20.83■□□□□ 0.93
NME3-208ENST00000565379 KLF9Q13886 244 aaPredicted RBP20.83■□□□□ 0.93
NME3-208ENST00000565379 RPL39P5Q59GN2 51 aa20.83■□□□□ 0.93
NME3-208ENST00000565379 LIAT1Q6ZQX7 453 aa20.83■□□□□ 0.93
NME3-208ENST00000565379 ADTRPQ96IZ2 230 aa20.83■□□□□ 0.93
NME3-208ENST00000565379 SDHCQ99643 169 aaPredicted RBP20.83■□□□□ 0.93
NME3-208ENST00000565379 PRRT1Q99946 306 aa20.83■□□□□ 0.93
NME3-208ENST00000565379 IGKV1D-13A0A0B4J2D9 117 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 FAM90A9PA6NNJ1 464 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 TIMM23O14925 209 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 AMY2AP04746 511 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 IGKV1-13P0DP09 117 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 ECI1P42126 302 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 UCP3P55916 312 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 FXYD4P59646 89 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 TAGLNQ01995 201 aaKnown RBP20.82■□□□□ 0.92
NME3-208ENST00000565379 FOXL1Q12952 345 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 BAK1Q16611 211 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 DRAM1Q8N682 238 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 OR4C16Q8NGL9 310 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 SECTM1Q8WVN6 248 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 CFHR4Q92496 578 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 NABP2Q9BQ15 211 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 ZNF747Q9BV97 191 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 SLC5A7Q9GZV3 580 aa20.82■□□□□ 0.92
NME3-208ENST00000565379 J3QRK9 145 aa20.81■□□□□ 0.92
NME3-208ENST00000565379 IGHV4-59P01825 116 aa20.81■□□□□ 0.92
NME3-208ENST00000565379 MC5RP33032 325 aa20.81■□□□□ 0.92
NME3-208ENST00000565379 ZNF57Q68EA5 555 aaPredicted RBP20.81■□□□□ 0.92
NME3-208ENST00000565379 LHFPL1Q86WI0 220 aa20.81■□□□□ 0.92
NME3-208ENST00000565379 OR4D10Q8NGI6 311 aa20.81■□□□□ 0.92
NME3-208ENST00000565379 TERB2Q8NHR7 220 aa20.81■□□□□ 0.92
NME3-208ENST00000565379 MRPL20Q9BYC9 149 aaKnown RBP20.81■□□□□ 0.92
NME3-208ENST00000565379 SLC2A8Q9NY64 477 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms