RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 NOVP48745 357 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 LPAL2Q16609 132 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 PRICKLE4Q2TBC4 344 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 OR11G2Q8NGC1 345 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 RLN3Q8WXF3 142 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FRRS1LQ9P0K9 344 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 LOXL2Q9Y4K0 774 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 RPS27P42677 84 aaKnown RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 SUMO2P61956 95 aaKnown RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 CTAG1AP78358 180 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 NKG7Q16617 165 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 DNM1P46Q6ZS02 220 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 CXorf67Q86X51 503 aaPredicted RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 GPR82Q96P67 336 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 TRPM7Q96QT4 1865 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 TRAV39A0A0B4J263 110 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 LINC01549A6NIU2 74 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 ZFAND6Q6FIF0 208 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 RHBDD2Q6NTF9 364 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 RFLNAQ6ZTI6 216 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 C17orf47Q8NEP4 570 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 HIST1H2BAQ96A08 127 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 KCNS1Q96KK3 526 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 LINC00470Q9BZP3 86 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 MMP17Q9ULZ9 603 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 F11RQ9Y624 299 aaKnown RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 STRCP1A6NGW2 1772 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 MT-CO3P00414 261 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 C10orf111Q8N326 155 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 RNF7Q9UBF6 113 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 TRAV30A0A087WSZ9 112 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 J3QT63 122 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 IGLV3-25P01717 112 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 PRF1P14222 555 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 CTLA4P16410 223 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 CD300CQ08708 224 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 ANKRD33Q7Z3H0 272 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 MDP1Q86V88 176 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 ADAD2Q8NCV1 583 aaKnown RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 SARGQ9BW04 601 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 COL22A1Q8NFW1 1626 aaPredicted RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 TSC2P49815 1807 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 KBTBD11-OT1A0A1B0GTJ5 212 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 MPZL1O95297 269 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 PSG2P11465 335 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 ID4P47928 161 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 CKS1BP61024 79 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 SNRPD3P62318 126 aaKnown RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 SERGEFQ9UGK8 458 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 INTS1Q8N201 2190 aaKnown RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 A0A1W2PQD3 144 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 ETHE1O95571 254 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 GCSAMQ8N6F7 178 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 TIMP4Q99727 224 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 DOPEY2Q9Y3R5 2298 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 PNLIPP16233 465 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 Q5PR19 223 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 BHLHA15Q7RTS1 189 aaPredicted RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 RTN4RL1Q86UN2 441 aaPredicted RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 HMGCLL1Q8TB92 370 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 PHLDA1Q8WV24 401 aaPredicted RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 NEU1Q99519 415 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 DNAJC4Q9NNZ3 241 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 TSPAN2O60636 221 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 SEC11AP67812 179 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 SSPNQ14714 243 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 GPX4P36969 197 aaPredicted RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 ASIPP42127 132 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 CACNG7P62955 275 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 SMOC1Q9H4F8 434 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 ZFP64Q9NPA5 681 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 C8orf88P0DMB2 117 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 FCGR2BP31994 310 aaPredicted RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 GCSAMLQ5JQS6 135 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 TIMM23BQ5SRD1 257 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 INO80CQ6PI98 192 aaPredicted RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 MRPL52Q86TS9 123 aaKnown RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 TAF15Q92804 592 aaKnown RBP eCLIP4.44□□□□□ -1.7
SMG1-211ENST00000565324 SFXN3Q9BWM7 321 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 ALPK2Q86TB3 2170 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 TMSB15BA0A087X1C1 80 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 SMIM14Q96QK8 99 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 NHSQ6T4R5 1651 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 TRBV20OR9-2A0A075B6H5 130 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 RPL36A-HNRNPH2H7BZ11 118 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 RRHO14718 337 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 GDF9O60383 454 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 FSTP19883 344 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 DEFB103AP81534 67 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 FAM159AQ6UWV7 190 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 TP53I13Q8NBR0 393 aaPredicted RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 MRPL24Q96A35 216 aaKnown RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 PGLYRP4Q96LB8 373 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 PCOLCE2Q9UKZ9 415 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 APOMO95445 188 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 ARL14EPLP0DKL9 152 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 NUBP1P53384 320 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 MMD2Q8IY49 270 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 DNASE2BQ8WZ79 361 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 ATOH1Q92858 354 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms