RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 PALMDQ9NP74 551 aa12.19□□□□□ -0.46
CDH11-210ENST00000564770 METTL1Q9UBP6 276 aaKnown RBP12.19□□□□□ -0.46
CDH11-210ENST00000564770 PSORS1C1Q9UIG5 152 aa12.19□□□□□ -0.46
CDH11-210ENST00000564770 TNCP24821 2201 aa12.19□□□□□ -0.46
CDH11-210ENST00000564770 IGKV1-16P04430 117 aa12.18□□□□□ -0.46
CDH11-210ENST00000564770 GSTP1P09211 210 aaKnown RBP12.18□□□□□ -0.46
CDH11-210ENST00000564770 UBBP0CG47 229 aa12.18□□□□□ -0.46
CDH11-210ENST00000564770 QRFPP83859 136 aa12.18□□□□□ -0.46
CDH11-210ENST00000564770 PSG5Q15238 335 aa12.18□□□□□ -0.46
CDH11-210ENST00000564770 AKIRIN2Q53H80 203 aa12.18□□□□□ -0.46
CDH11-210ENST00000564770 RBM48Q5RL73 367 aaKnown RBP12.18□□□□□ -0.46
CDH11-210ENST00000564770 C1orf100Q5SVJ3 147 aa12.18□□□□□ -0.46
CDH11-210ENST00000564770 TTC23Q5W5X9 447 aa12.18□□□□□ -0.46
CDH11-210ENST00000564770 DRAXINQ8NBI3 349 aaPredicted RBP12.18□□□□□ -0.46
CDH11-210ENST00000564770 RHOVQ96L33 236 aa12.18□□□□□ -0.46
CDH11-210ENST00000564770 OR4C12Q96R67 309 aa12.18□□□□□ -0.46
CDH11-210ENST00000564770 C11orf54Q9H0W9 315 aaPredicted RBP12.18□□□□□ -0.46
CDH11-210ENST00000564770 CHMP1AQ9HD42 196 aaPredicted RBP12.18□□□□□ -0.46
CDH11-210ENST00000564770 C19orf73Q9NVV2 129 aa12.18□□□□□ -0.46
CDH11-210ENST00000564770 LRRC42Q9Y546 428 aa12.18□□□□□ -0.46
CDH11-210ENST00000564770 TMEM14DPA8MWL7 114 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 ITGB1BP1O14713 200 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 ARPC1BO15143 372 aaKnown RBP12.17□□□□□ -0.46
CDH11-210ENST00000564770 HSPA12AO43301 675 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 RBBP9O75884 186 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 TRGV3P03979 118 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 TFAP2AP05549 437 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 HLA-DRB3P79483 266 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 DEFA5Q01523 94 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 TMEM267Q0VDI3 215 aaPredicted RBP12.17□□□□□ -0.46
CDH11-210ENST00000564770 MOB1BQ7L9L4 216 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 NANOGP1Q8N7R0 232 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 ZNF383Q8NA42 475 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 THRSPQ92748 146 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 FLYWCH2Q96CP2 140 aaKnown RBP12.17□□□□□ -0.46
CDH11-210ENST00000564770 RSRP1Q9BUV0 290 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 SLA2Q9H6Q3 261 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 AK3Q9UIJ7 227 aa12.17□□□□□ -0.46
CDH11-210ENST00000564770 A8MZ25 164 aa12.16□□□□□ -0.46
CDH11-210ENST00000564770 SLC22A1O15245 554 aa12.16□□□□□ -0.46
CDH11-210ENST00000564770 MC5RP33032 325 aa12.16□□□□□ -0.46
CDH11-210ENST00000564770 ACSM3Q53FZ2 586 aa12.16□□□□□ -0.46
CDH11-210ENST00000564770 ZNF562Q6V9R5 426 aa12.16□□□□□ -0.46
CDH11-210ENST00000564770 GRPEL2Q8TAA5 225 aa12.16□□□□□ -0.46
CDH11-210ENST00000564770 LPAR5Q9H1C0 372 aa12.16□□□□□ -0.46
CDH11-210ENST00000564770 FKBP14Q9NWM8 211 aa12.16□□□□□ -0.46
CDH11-210ENST00000564770 RNF150Q9ULK6 438 aa12.16□□□□□ -0.46
CDH11-210ENST00000564770 STUB1Q9UNE7 303 aa12.16□□□□□ -0.46
CDH11-210ENST00000564770 TRBV6-6A0A0A6YYG2 114 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 FOXI3A8MTJ6 420 aaPredicted RBP12.15□□□□□ -0.46
CDH11-210ENST00000564770 LDLRAD4O15165 306 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 SOCS1O15524 211 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 SLC25A17O43808 307 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 SPDEFO95238 335 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 CPEP16870 476 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 GLT8D1Q68CQ7 371 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 ADAMTSL5Q6ZMM2 481 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 DHRSXQ8N5I4 330 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 POC5Q8NA72 575 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 KCNG3Q8TAE7 436 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 FBLIM1Q8WUP2 373 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 PHYHIPQ92561 330 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 ISOC1Q96CN7 298 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 GFI1Q99684 422 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 TMED9Q9BVK6 235 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 ADAM30Q9UKF2 790 aa12.15□□□□□ -0.46
CDH11-210ENST00000564770 IGKV1-6A0A0C4DH72 117 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 IGLV2-23P01705 113 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 SCTP09683 121 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 CD37P11049 281 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 CEACAM6P40199 344 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 IL34Q6ZMJ4 242 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 ANKRD13BQ86YJ7 626 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 C8orf59Q8N0T1 100 aaPredicted RBP12.14□□□□□ -0.47
CDH11-210ENST00000564770 PACRGLQ8N7B6 248 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 BPIFB6Q8NFQ5 453 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 EDARADDQ8WWZ3 215 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 RNF5Q99942 180 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 THAP7Q9BT49 309 aaPredicted RBP12.14□□□□□ -0.47
CDH11-210ENST00000564770 ELOVL1Q9BW60 279 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 PLCXD1Q9NUJ7 323 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 PLEKHJ1Q9NW61 149 aa12.14□□□□□ -0.47
CDH11-210ENST00000564770 LSM2Q9Y333 95 aaKnown RBP12.14□□□□□ -0.47
CDH11-210ENST00000564770 BPNT1O95861 308 aa12.13□□□□□ -0.47
CDH11-210ENST00000564770 ARSBP15848 533 aa12.13□□□□□ -0.47
CDH11-210ENST00000564770 ZBTB25P24278 435 aa12.13□□□□□ -0.47
CDH11-210ENST00000564770 PJVKQ0ZLH3 352 aa12.13□□□□□ -0.47
CDH11-210ENST00000564770 FXYD3Q14802 87 aa12.13□□□□□ -0.47
CDH11-210ENST00000564770 P2RY14Q15391 338 aa12.13□□□□□ -0.47
CDH11-210ENST00000564770 PDPNQ86YL7 162 aa12.13□□□□□ -0.47
CDH11-210ENST00000564770 OR5T1Q8NG75 326 aa12.13□□□□□ -0.47
CDH11-210ENST00000564770 OR6M1Q8NGM8 313 aa12.13□□□□□ -0.47
CDH11-210ENST00000564770 PTX4Q96A99 478 aa12.13□□□□□ -0.47
CDH11-210ENST00000564770 C5orf30Q96GV9 206 aa12.13□□□□□ -0.47
CDH11-210ENST00000564770 TSNAXQ99598 290 aaKnown RBP12.13□□□□□ -0.47
CDH11-210ENST00000564770 Q9N2K0 584 aa12.13□□□□□ -0.47
CDH11-210ENST00000564770 ANKRD34BA5PLL1 514 aa12.12□□□□□ -0.47
CDH11-210ENST00000564770 RBMXL2O75526 392 aaKnown RBP12.12□□□□□ -0.47
CDH11-210ENST00000564770 TRBV12-3P01733 135 aa12.12□□□□□ -0.47
CDH11-210ENST00000564770 UCHL1P09936 223 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms