RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 RBM38Q9H0Z9 239 aaKnown RBP12.79□□□□□ -0.36
RAB40C-208ENST00000564703 OR2D2Q9H210 308 aa12.79□□□□□ -0.36
RAB40C-208ENST00000564703 MMP27Q9H306 513 aa12.79□□□□□ -0.36
RAB40C-208ENST00000564703 C16orf95Q9H693 158 aa12.79□□□□□ -0.36
RAB40C-208ENST00000564703 RNF114Q9Y508 228 aa12.79□□□□□ -0.36
RAB40C-208ENST00000564703 MMP24Q9Y5R2 645 aa12.79□□□□□ -0.36
RAB40C-208ENST00000564703 CUBNO60494 3623 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 H7C2Y5 167 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 PEX14O75381 377 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 RBBP9O75884 186 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 FCGR2CP31995 323 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 S100A5P33763 92 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 LSAMPQ13449 338 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 EBI3Q14213 229 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 LAX1Q8IWV1 398 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 OR5H2Q8NGV7 314 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 LINC01006Q8NI28 216 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 GPX8Q8TED1 209 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 MIXL1Q9H2W2 232 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 MOB4Q9Y3A3 225 aa12.78□□□□□ -0.36
RAB40C-208ENST00000564703 DPPA5A6NC42 116 aa12.77□□□□□ -0.37
RAB40C-208ENST00000564703 ZNF736B4DX44 427 aaPredicted RBP12.77□□□□□ -0.37
RAB40C-208ENST00000564703 M0R1X1 148 aa12.77□□□□□ -0.37
RAB40C-208ENST00000564703 HAX1O00165 279 aa12.77□□□□□ -0.37
RAB40C-208ENST00000564703 CT45A6P0DMU7 189 aa12.77□□□□□ -0.37
RAB40C-208ENST00000564703 CT45A5P0DMU8 189 aa12.77□□□□□ -0.37
RAB40C-208ENST00000564703 CT45A7P0DMV0 189 aa12.77□□□□□ -0.37
RAB40C-208ENST00000564703 BLCAPP62952 87 aa12.77□□□□□ -0.37
RAB40C-208ENST00000564703 IL18Q14116 193 aa12.77□□□□□ -0.37
RAB40C-208ENST00000564703 C9orf152Q5JTZ5 239 aa12.77□□□□□ -0.37
RAB40C-208ENST00000564703 C11orf88Q6PI97 169 aa12.77□□□□□ -0.37
RAB40C-208ENST00000564703 DRAXINQ8NBI3 349 aaPredicted RBP12.77□□□□□ -0.37
RAB40C-208ENST00000564703 OR8H1Q8NGG4 311 aa12.77□□□□□ -0.37
RAB40C-208ENST00000564703 ZNF251Q9BRH9 671 aa12.77□□□□□ -0.37
RAB40C-208ENST00000564703 EHFQ9NZC4 300 aa12.77□□□□□ -0.37
RAB40C-208ENST00000564703 FABP12A6NFH5 140 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 OR5H14A6NHG9 310 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 APOA2P02652 100 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 PMP2P02689 132 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 NAT1P18440 290 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 HLA-DMAP28067 261 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 RCVRNP35243 200 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 TSPAN5P62079 268 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 MRPS10P82664 201 aaKnown RBP12.76□□□□□ -0.37
RAB40C-208ENST00000564703 CBX3Q13185 183 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 ABCA11PQ4W5N1 156 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 PYHIN1Q6K0P9 492 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 GIMAP1Q8WWP7 306 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 SNAPC3Q92966 411 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 ABHD1Q96SE0 405 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 RASL11BQ9BPW5 248 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 NXF2Q9GZY0 626 aaKnown RBP12.76□□□□□ -0.37
RAB40C-208ENST00000564703 SDHAF2Q9NX18 166 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 A3GALT2U3KPV4 340 aa12.76□□□□□ -0.37
RAB40C-208ENST00000564703 FGF16O43320 207 aa12.75□□□□□ -0.37
RAB40C-208ENST00000564703 TNFSF8P32971 234 aa12.75□□□□□ -0.37
RAB40C-208ENST00000564703 RFX2P48378 723 aa12.75□□□□□ -0.37
RAB40C-208ENST00000564703 ACTBP60709 375 aa12.75□□□□□ -0.37
RAB40C-208ENST00000564703 HERV-K104P61576 105 aa12.75□□□□□ -0.37
RAB40C-208ENST00000564703 TAGLNQ01995 201 aaKnown RBP12.75□□□□□ -0.37
RAB40C-208ENST00000564703 RNASE12Q5GAN4 147 aaKnown RBP12.75□□□□□ -0.37
RAB40C-208ENST00000564703 FAM131AQ6UXB0 335 aa12.75□□□□□ -0.37
RAB40C-208ENST00000564703 GLDNQ6ZMI3 551 aaPredicted RBP12.75□□□□□ -0.37
RAB40C-208ENST00000564703 LYSMD2Q8IV50 215 aa12.75□□□□□ -0.37
RAB40C-208ENST00000564703 ZNF645Q8N7E2 425 aa12.75□□□□□ -0.37
RAB40C-208ENST00000564703 OR6F1Q8NGZ6 308 aa12.75□□□□□ -0.37
RAB40C-208ENST00000564703 ADTRPQ96IZ2 230 aa12.75□□□□□ -0.37
RAB40C-208ENST00000564703 ANAPC10Q9UM13 185 aa12.75□□□□□ -0.37
RAB40C-208ENST00000564703 WASHC3Q9Y3C0 194 aa12.75□□□□□ -0.37
RAB40C-208ENST00000564703 GABARAPH6UMI1 98 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 PROP1O75360 226 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 TUSC2O75896 110 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 IFNA6P05013 189 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 AADACP22760 399 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 THBS3P49746 956 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 DYRK1AQ13627 763 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 DHRS11Q6UWP2 260 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 OVCH2Q7RTZ1 564 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 OR5AN1Q8NGI8 311 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 OR52I2Q8NH67 350 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 SECTM1Q8WVN6 248 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 BORCS5Q969J3 196 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 RNF5Q99942 180 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 ZNF747Q9BV97 191 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 ZNF702PQ9H963 129 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 KIAA1456Q9P272 454 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 KLK11Q9UBX7 282 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 SIGLEC9Q9Y336 463 aa12.74□□□□□ -0.37
RAB40C-208ENST00000564703 H0YJW9 148 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 PPYP01298 95 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 RRASP10301 218 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 HRH1P35367 487 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 VDAC2P45880 294 aaPredicted RBP12.73□□□□□ -0.37
RAB40C-208ENST00000564703 FXYD4P59646 89 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 RPS16P62249 146 aaKnown RBP12.73□□□□□ -0.37
RAB40C-208ENST00000564703 MMDQ15546 238 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 RTL8BQ17RB0 113 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 ACTBL2Q562R1 376 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 SHISA2Q6UWI4 295 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 TMEM17Q86X19 198 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms