RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TNFRSF14Q92956 283 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 C1orf159Q96HA4 380 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 Q96MF0 132 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 NEURL2Q9BR09 285 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 ZNF251Q9BRH9 671 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 CLEC7AQ9BXN2 247 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 KCNIP3Q9Y2W7 256 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 INSIG2Q9Y5U4 225 aa8.29□□□□□ -1.08
SMG1-208ENST00000563448 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.28□□□□□ -1.083e-7■■■■■ 31.5
SMG1-208ENST00000563448 A0A0B4J2A0 478 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 DBX1A6NMT0 343 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 RNF223E7ERA6 249 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 RAB29O14966 203 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 TRAPPC2P0DI81 140 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 TRAPPC2BP0DI82 140 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 MMP9P14780 707 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 COX7A1P24310 79 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 S100GP29377 79 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 LINC00205P59089 165 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 LOXL1Q08397 574 aaPredicted RBP8.28□□□□□ -1.08
SMG1-208ENST00000563448 VMO1Q7Z5L0 202 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 PNKDQ8N490 385 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.28□□□□□ -1.08
SMG1-208ENST00000563448 OR51H1Q8NH63 302 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 C17orf50Q8WW18 174 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 MSI2Q96DH6 328 aaKnown RBP8.28□□□□□ -1.08
SMG1-208ENST00000563448 PHB2Q99623 299 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 REG4Q9BYZ8 158 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 METTL8Q9H825 291 aaKnown RBP8.28□□□□□ -1.08
SMG1-208ENST00000563448 PIPOXQ9P0Z9 390 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 SHPKQ9UHJ6 478 aa8.28□□□□□ -1.08
SMG1-208ENST00000563448 LINC00473A8K010 186 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 IGLV1-47P01700 117 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 ANXA3P12429 323 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 DUTP33316 252 aaKnown RBP8.27□□□□□ -1.09
SMG1-208ENST00000563448 CD300CQ08708 224 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 KLRD1Q13241 179 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 C11orf88Q6PI97 169 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 ZNF66Q6ZN08 573 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 LIAT1Q6ZQX7 453 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 MAPK1IP1LQ8NDC0 245 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 COQ8AQ8NI60 647 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 LHFPL5Q8TAF8 219 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 TBX15Q96SF7 602 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 TMEM222Q9H0R3 208 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 UNKLQ9H9P5 680 aaKnown RBP8.27□□□□□ -1.09
SMG1-208ENST00000563448 MGAT4CQ9UBM8 478 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 RNF212BA8MTL3 300 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 A8MV72 311 aaPredicted RBP8.27□□□□□ -1.09
SMG1-208ENST00000563448 H0Y980 276 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 M0R1X1 148 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 TOR1AO14656 332 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 TOX4O94842 621 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 MSMBP08118 114 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 ZNF16P17020 682 aaPredicted RBP8.27□□□□□ -1.09
SMG1-208ENST00000563448 HOXB4P17483 251 aaPredicted RBP8.27□□□□□ -1.09
SMG1-208ENST00000563448 UCP1P25874 307 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 PRRX1P54821 245 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 BRWD1-AS2P59051 145 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 PAX8Q06710 450 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 DIAPH2-AS1Q14236 149 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 HLA-DRB5Q30154 266 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 ZNF833PQ6ZTB9 187 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 LRTM2Q8N967 370 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 BEND2Q8NDZ0 799 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 OR13D1Q8NGV5 346 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 OR10X1Q8NGY0 326 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 ST6GALNAC6Q969X2 333 aa8.27□□□□□ -1.09
SMG1-208ENST00000563448 HSD17B10Q99714 261 aaKnown RBP8.27□□□□□ -1.09
SMG1-208ENST00000563448 TET2Q6N021 2002 aaPredicted RBP8.26□□□□□ -1.09
SMG1-208ENST00000563448 RNASEK-C17orf49H0YIS7 233 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 GOSR2O14653 212 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 SIX6O95475 246 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 ZNF137PP52743 207 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 CATR1Q13166 79 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 ZNF585BQ52M93 769 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 NCR3LG1Q68D85 454 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 AKAP14Q86UN6 197 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 SELENOHQ8IZQ5 122 aaKnown RBP8.26□□□□□ -1.09
SMG1-208ENST00000563448 OR11H6Q8NGC7 330 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 OR4P4Q8NGL7 312 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 TCTEX1D2Q8WW35 142 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 TMEM186Q96B77 213 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 ST6GAL2Q96JF0 529 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 C18orf12Q96KH6 178 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 TMEM56Q96MV1 263 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 S1PR3Q99500 378 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 FOXC2Q99958 501 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 PCGF1Q9BSM1 259 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 HEXA-AS1Q9H8Q6 139 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 LIN7CQ9NUP9 197 aaKnown RBP8.26□□□□□ -1.09
SMG1-208ENST00000563448 TMEM56-RWDD3S4R434 201 aa8.26□□□□□ -1.09
SMG1-208ENST00000563448 ODF3BA8MYP8 253 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 B4DSR2 109 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 BUB1B-PAK6H3BSN5 160 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 CCSO14618 274 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 ADAP1O75689 374 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 B3GALNT1O75752 331 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 CCNKO75909 580 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 CDS2O95674 445 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms