RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 C11orf54Q9H0W9 315 aaPredicted RBP16.16■□□□□ 0.18
CHD9-208ENST00000563410 GHITMQ9H3K2 345 aa16.16■□□□□ 0.18
CHD9-208ENST00000563410 RIMS4Q9H426 269 aaPredicted RBP16.16■□□□□ 0.18
CHD9-208ENST00000563410 FOXI3A8MTJ6 420 aaPredicted RBP16.15■□□□□ 0.18
CHD9-208ENST00000563410 H7C2Y5 167 aa16.15■□□□□ 0.18
CHD9-208ENST00000563410 GSTP1P09211 210 aaKnown RBP16.15■□□□□ 0.18
CHD9-208ENST00000563410 CEACAM6P40199 344 aa16.15■□□□□ 0.18
CHD9-208ENST00000563410 HLA-DRB3P79483 266 aa16.15■□□□□ 0.18
CHD9-208ENST00000563410 TMEM267Q0VDI3 215 aaPredicted RBP16.15■□□□□ 0.18
CHD9-208ENST00000563410 AKIRIN2Q53H80 203 aa16.15■□□□□ 0.18
CHD9-208ENST00000563410 PPP1R27Q86WC6 154 aa16.15■□□□□ 0.18
CHD9-208ENST00000563410 FAM89BQ8N5H3 189 aa16.15■□□□□ 0.18
CHD9-208ENST00000563410 ABHD5Q8WTS1 349 aa16.15■□□□□ 0.18
CHD9-208ENST00000563410 CLCC1Q96S66 551 aa16.15■□□□□ 0.18
CHD9-208ENST00000563410 RNF5Q99942 180 aa16.15■□□□□ 0.18
CHD9-208ENST00000563410 PTGES3LE9PB15 166 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 IGHV3-11P01762 117 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 SCTP09683 121 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 GP9P14770 177 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 ZBTB25P24278 435 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 TMEM50BP56557 158 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 LINC00205P59089 165 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 PSG5Q15238 335 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 ACTBL2Q562R1 376 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 PYHIN1Q6K0P9 492 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 UNQ5815/PRO19632Q6UWF5 114 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 ZNF562Q6V9R5 426 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 DRAXINQ8NBI3 349 aaPredicted RBP16.14■□□□□ 0.17
CHD9-208ENST00000563410 LFNGQ8NES3 379 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 ARPC1AQ92747 370 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 RHOVQ96L33 236 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 RNF150Q9ULK6 438 aa16.14■□□□□ 0.17
CHD9-208ENST00000563410 CSMD3Q7Z407 3707 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 IGKV1-16P04430 117 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 IRF3Q14653 427 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 P2RY14Q15391 338 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 MED22Q15528 200 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 LIPKQ5VXJ0 399 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 TMEM91Q6ZNR0 172 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 OVCH2Q7RTZ1 564 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 ZNF383Q8NA42 475 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 EDARADDQ8WWZ3 215 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 PTX4Q96A99 478 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 MS4A10Q96PG2 267 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 Q9N2K0 584 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 METTL1Q9UBP6 276 aaKnown RBP16.13■□□□□ 0.17
CHD9-208ENST00000563410 HSF4Q9ULV5 492 aa16.13■□□□□ 0.17
CHD9-208ENST00000563410 IGKV1-6A0A0C4DH72 117 aa16.12■□□□□ 0.17
CHD9-208ENST00000563410 SLC17A2O00624 439 aa16.12■□□□□ 0.17
CHD9-208ENST00000563410 CA2P00918 260 aa16.12■□□□□ 0.17
CHD9-208ENST00000563410 HSPB1P04792 205 aaKnown RBP16.12■□□□□ 0.17
CHD9-208ENST00000563410 OR8U9P0C7N5 309 aa16.12■□□□□ 0.17
CHD9-208ENST00000563410 FRMD6-AS1P0C7T7 363 aa16.12■□□□□ 0.17
CHD9-208ENST00000563410 ARSBP15848 533 aa16.12■□□□□ 0.17
CHD9-208ENST00000563410 TMEM203Q969S6 136 aa16.12■□□□□ 0.17
CHD9-208ENST00000563410 RCHY1Q96PM5 261 aa16.12■□□□□ 0.17
CHD9-208ENST00000563410 LYSTQ99698 3801 aa16.12■□□□□ 0.17
CHD9-208ENST00000563410 URM1Q9BTM9 101 aaKnown RBP16.12■□□□□ 0.17
CHD9-208ENST00000563410 MGAT4AQ9UM21 535 aa16.12■□□□□ 0.17
CHD9-208ENST00000563410 TNCP24821 2201 aa16.11■□□□□ 0.17
CHD9-208ENST00000563410 RYR2Q92736 4967 aa16.11■□□□□ 0.17
CHD9-208ENST00000563410 TRIM64CA6NLI5 447 aa16.11■□□□□ 0.17
CHD9-208ENST00000563410 HSPA12AO43301 675 aa16.11■□□□□ 0.17
CHD9-208ENST00000563410 TPPP2P59282 170 aa16.11■□□□□ 0.17
CHD9-208ENST00000563410 OR6Q1Q8NGQ2 317 aa16.11■□□□□ 0.17
CHD9-208ENST00000563410 MUC7Q8TAX7 377 aa16.11■□□□□ 0.17
CHD9-208ENST00000563410 ARHGAP5-AS1Q96IT6 56 aa16.11■□□□□ 0.17
CHD9-208ENST00000563410 AK6Q9Y3D8 172 aaKnown RBP16.11■□□□□ 0.17
CHD9-208ENST00000563410 TENM2Q9NT68 2774 aa16.11■□□□□ 0.17
CHD9-208ENST00000563410 ARPC1BO15143 372 aaKnown RBP16.1■□□□□ 0.17
CHD9-208ENST00000563410 SPDEFO95238 335 aa16.1■□□□□ 0.17
CHD9-208ENST00000563410 TFAP2AP05549 437 aa16.1■□□□□ 0.17
CHD9-208ENST00000563410 CPEP16870 476 aa16.1■□□□□ 0.17
CHD9-208ENST00000563410 RPS16P62249 146 aaKnown RBP16.1■□□□□ 0.17
CHD9-208ENST00000563410 SSBP2P81877 361 aaPredicted RBP16.1■□□□□ 0.17
CHD9-208ENST00000563410 PITPNAQ00169 270 aa16.1■□□□□ 0.17
CHD9-208ENST00000563410 UFD1Q92890 307 aa16.1■□□□□ 0.17
CHD9-208ENST00000563410 FLYWCH2Q96CP2 140 aaKnown RBP16.1■□□□□ 0.17
CHD9-208ENST00000563410 PECRQ9BY49 303 aa16.1■□□□□ 0.17
CHD9-208ENST00000563410 SLA2Q9H6Q3 261 aa16.1■□□□□ 0.17
CHD9-208ENST00000563410 PLGRKTQ9HBL7 147 aa16.1■□□□□ 0.17
CHD9-208ENST00000563410 C12orf4Q9NQ89 552 aa16.1■□□□□ 0.17
CHD9-208ENST00000563410 VEGFCP49767 419 aa16.09■□□□□ 0.17
CHD9-208ENST00000563410 RPS25P62851 125 aaKnown RBP16.09■□□□□ 0.17
CHD9-208ENST00000563410 TPBGQ13641 420 aa16.09■□□□□ 0.17
CHD9-208ENST00000563410 PLAC9Q5JTB6 97 aa16.09■□□□□ 0.17
CHD9-208ENST00000563410 CASC10Q5T4H9 136 aa16.09■□□□□ 0.17
CHD9-208ENST00000563410 HAPLN4Q86UW8 402 aa16.09■□□□□ 0.17
CHD9-208ENST00000563410 TSNAXQ99598 290 aaKnown RBP16.09■□□□□ 0.17
CHD9-208ENST00000563410 ZNF221Q9UK13 617 aa16.09■□□□□ 0.17
CHD9-208ENST00000563410 SACSQ9NZJ4 4579 aa16.09■□□□□ 0.17
CHD9-208ENST00000563410 SLC25A17O43808 307 aa16.08■□□□□ 0.16
CHD9-208ENST00000563410 TRGV3P03979 118 aa16.08■□□□□ 0.16
CHD9-208ENST00000563410 CLDN12P56749 244 aa16.08■□□□□ 0.16
CHD9-208ENST00000563410 FXYD3Q14802 87 aa16.08■□□□□ 0.16
CHD9-208ENST00000563410 PDPNQ86YL7 162 aa16.08■□□□□ 0.16
CHD9-208ENST00000563410 OR4C12Q96R67 309 aa16.08■□□□□ 0.16
CHD9-208ENST00000563410 CMSS1Q9BQ75 279 aaKnown RBP16.08■□□□□ 0.16
CHD9-208ENST00000563410 SCN3BQ9NY72 215 aa16.08■□□□□ 0.16
CHD9-208ENST00000563410 RDH8Q9NYR8 311 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms