RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 PFDN5Q99471 154 aa10.99□□□□□ -0.65
USB1-207ENST00000563149 CXXC4Q9H2H0 198 aa10.99□□□□□ -0.65
USB1-207ENST00000563149 C17orf112F2Z3M2 114 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 IGKV1D-33P01593 117 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 IGKV1-33P01594 117 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 HBZP02008 142 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 GRPP07492 148 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 HIST1H1BP16401 226 aaKnown RBP10.98□□□□□ -0.65
USB1-207ENST00000563149 G6PCP35575 357 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 IDH3GP51553 393 aaPredicted RBP10.98□□□□□ -0.65
USB1-207ENST00000563149 GNB2P62879 340 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 RPL30P62888 115 aaKnown RBP10.98□□□□□ -0.65
USB1-207ENST00000563149 ACSM6Q6P461 480 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 TRAT1Q6PIZ9 186 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 BEND4Q6ZU67 534 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 TMEM178AQ8NBL3 297 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 OR10G9Q8NGN4 311 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 OR10G7Q8NGN6 311 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 UBALD1Q8TB05 177 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 DTD1Q8TEA8 209 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 FAM216AQ8WUB2 273 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 GPR61Q9BZJ8 451 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 ARRDC1-AS1Q9H2J1 176 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 ZDHHC11Q9H8X9 412 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 SPRR3Q9UBC9 169 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 ESPL1Q14674 2120 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 SPEGQ15772 3267 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 IFNL4K9M1U5 179 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 PSPNO60542 156 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 TNFSF15O95150 251 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 KRASP01116 189 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 CELA3BP08861 270 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 FGF7P21781 194 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 IGHV1-2P23083 117 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 ZNF816Q0VGE8 651 aaPredicted RBP10.98□□□□□ -0.65
USB1-207ENST00000563149 LPAL2Q16609 132 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 MYPOPQ86VE0 399 aaPredicted RBP10.98□□□□□ -0.65
USB1-207ENST00000563149 ZNF709Q8N972 641 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 ZNF383Q8NA42 475 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 OR5B12Q96R08 314 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 HSD17B10Q99714 261 aaKnown RBP10.98□□□□□ -0.65
USB1-207ENST00000563149 WASF3Q9UPY6 502 aa10.98□□□□□ -0.65
USB1-207ENST00000563149 SMCO3A2RU48 225 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 RAMP3O60896 148 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 S1PR2O95136 353 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 VENTXO95231 258 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 MDKP21741 143 aaPredicted RBP10.97□□□□□ -0.65
USB1-207ENST00000563149 ERVS71-1P61550 626 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 RPL23P62829 140 aaKnown RBP10.97□□□□□ -0.65
USB1-207ENST00000563149 PAX5Q02548 391 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 ADIRFQ15847 76 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 TMEM249Q2WGJ8 235 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 ALKBH6Q3KRA9 238 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 FFAR4Q5NUL3 377 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 ACP7Q6ZNF0 438 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 H2BFWTQ7Z2G1 175 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 C16orf82Q7Z2V1 217 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 OR52L2PQ8NGH6 319 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 KLF14Q8TD94 323 aaPredicted RBP10.97□□□□□ -0.65
USB1-207ENST00000563149 C5orf30Q96GV9 206 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 OBP2BQ9NPH6 170 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 GFOD1Q9NXC2 390 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 IL17BQ9UHF5 180 aa10.97□□□□□ -0.65
USB1-207ENST00000563149 FAM90A9PA6NNJ1 464 aa10.96□□□□□ -0.65
USB1-207ENST00000563149 C17orf98A8MV24 154 aa10.96□□□□□ -0.65
USB1-207ENST00000563149 ACOT6Q3I5F7 207 aaPredicted RBP10.96□□□□□ -0.65
USB1-207ENST00000563149 FAM180AQ6UWF9 173 aa10.96□□□□□ -0.65
USB1-207ENST00000563149 C11orf53Q8IXP5 236 aa10.96□□□□□ -0.65
USB1-207ENST00000563149 DIRC2Q96SL1 478 aa10.96□□□□□ -0.65
USB1-207ENST00000563149 PARLQ9H300 379 aa10.96□□□□□ -0.65
USB1-207ENST00000563149 CLN8Q9UBY8 286 aa10.96□□□□□ -0.65
USB1-207ENST00000563149 PRUNE2Q8WUY3 3088 aa10.96□□□□□ -0.66
USB1-207ENST00000563149 H7BYZ3 331 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 ZG16O60844 167 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 WISP2O76076 250 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 CD55P08174 381 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 ADH4P08319 380 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 CD59P13987 128 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 GALR1P47211 349 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 SOX8P57073 446 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 BRWD1-AS2P59051 145 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 HTD2P86397 168 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 Q6ZT83 130 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 TMEM183AQ8IXX5 376 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 OR51G1Q8NGK1 321 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 OR4X1Q8NH49 305 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 NEIL1Q96FI4 390 aaPredicted RBP10.95□□□□□ -0.66
USB1-207ENST00000563149 COQ2Q96H96 371 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 LOXL4Q96JB6 756 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 SSX3Q99909 188 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 NPCDR1Q9BY65 106 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 SLC25A22Q9H936 323 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 CLCF1Q9UBD9 225 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 MLNRO43193 412 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 IGKV3-15P01624 115 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 KITLGP21583 273 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 SRP14P37108 136 aaKnown RBP10.95□□□□□ -0.66
USB1-207ENST00000563149 MPV17P39210 176 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 CEBPDP49716 269 aaPredicted RBP10.95□□□□□ -0.66
USB1-207ENST00000563149 RPP30P78346 268 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms