RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 KCNG3Q8TAE7 436 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 EDARADDQ8WWZ3 215 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 ISOC1Q96CN7 298 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 CITED4Q96RK1 184 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 NICN1Q9BSH3 213 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 KCNK15Q9H427 330 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 PLEKHJ1Q9NW61 149 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 SORL1Q92673 2214 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 BIRC6Q9NR09 4857 aa9.99□□□□□ -0.81
SF3B3-202ENST00000562722 ANKRD34BA5PLL1 514 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 ARPC1BO15143 372 aaKnown RBP9.98□□□□□ -0.81
SF3B3-202ENST00000562722 SLC22A1O15245 554 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 TFAP2AP05549 437 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 CD1AP06126 327 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 ARSBP15848 533 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 ZBTB25P24278 435 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 CEACAM6P40199 344 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 RPS16P62249 146 aaKnown RBP9.98□□□□□ -0.81
SF3B3-202ENST00000562722 ACSM3Q53FZ2 586 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 ZNF562Q6V9R5 426 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 BPIFB6Q8NFQ5 453 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 OR5AN1Q8NGI8 311 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 RHOVQ96L33 236 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 TSNAXQ99598 290 aaKnown RBP9.98□□□□□ -0.81
SF3B3-202ENST00000562722 RNF5Q99942 180 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 TMED9Q9BVK6 235 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 C11orf54Q9H0W9 315 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-202ENST00000562722 OR1A1Q9P1Q5 309 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 ZNF221Q9UK13 617 aa9.98□□□□□ -0.81
SF3B3-202ENST00000562722 LCE6AA0A183 80 aa9.97□□□□□ -0.81
SF3B3-202ENST00000562722 CNIH1O95406 144 aa9.97□□□□□ -0.81
SF3B3-202ENST00000562722 NAPSAO96009 420 aa9.97□□□□□ -0.81
SF3B3-202ENST00000562722 APOA2P02652 100 aa9.97□□□□□ -0.81
SF3B3-202ENST00000562722 ZP3P21754 424 aa9.97□□□□□ -0.81
SF3B3-202ENST00000562722 HLA-DRB3P79483 266 aa9.97□□□□□ -0.81
SF3B3-202ENST00000562722 UNC119Q13432 240 aa9.97□□□□□ -0.81
SF3B3-202ENST00000562722 FXYD3Q14802 87 aa9.97□□□□□ -0.81
SF3B3-202ENST00000562722 C8orf59Q8N0T1 100 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-202ENST00000562722 POC5Q8NA72 575 aa9.97□□□□□ -0.81
SF3B3-202ENST00000562722 TM2D3Q9BRN9 247 aa9.97□□□□□ -0.81
SF3B3-202ENST00000562722 HDHD3Q9BSH5 251 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-202ENST00000562722 TM2D1Q9BX74 207 aa9.97□□□□□ -0.81
SF3B3-202ENST00000562722 RIMS4Q9H426 269 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-202ENST00000562722 RANGRFQ9HD47 186 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-202ENST00000562722 AK3Q9UIJ7 227 aa9.97□□□□□ -0.81
SF3B3-202ENST00000562722 STARD9Q9P2P6 4700 aa9.97□□□□□ -0.81
SF3B3-202ENST00000562722 ITGB1BP1O14713 200 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 SLC25A17O43808 307 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 SPDEFO95238 335 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 BPNT1O95861 308 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 IGLV1-51P01701 117 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 IGKV1-16P04430 117 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 SNRPBP14678 240 aaKnown RBP9.96□□□□□ -0.82
SF3B3-202ENST00000562722 HSD17B12Q53GQ0 312 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 C1orf100Q5SVJ3 147 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 ZNF880Q6PDB4 577 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 CEACAM19Q7Z692 300 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 LRRTM1Q86UE6 522 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 MS4A15Q8N5U1 240 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 PACRGLQ8N7B6 248 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 NANOGP1Q8N7R0 232 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 OR5T1Q8NG75 326 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 PHYHIPQ92561 330 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 AGMATQ9BSE5 352 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 URM1Q9BTM9 101 aaKnown RBP9.96□□□□□ -0.82
SF3B3-202ENST00000562722 C8orf4Q9NR00 106 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 PSORS1C1Q9UIG5 152 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 MGAT4AQ9UM21 535 aa9.96□□□□□ -0.82
SF3B3-202ENST00000562722 TENM2Q9NT68 2774 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 A0A0G2JLM5 398 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 H0Y980 276 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 M0R1X1 148 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 GNAO1P09471 354 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 SCTP09683 121 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 SRMP19623 302 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 P2RY14Q15391 338 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 GTSCR1Q86UQ5 136 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 PDPNQ86YL7 162 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 Q8N1Y9 231 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 ZNF383Q8NA42 475 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 OR6M1Q8NGM8 313 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 SPATA25Q9BR10 227 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 MND1Q9BWT6 205 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 TUBA4BQ9H853 241 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 PLGRKTQ9HBL7 147 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 C12orf4Q9NQ89 552 aa9.95□□□□□ -0.82
SF3B3-202ENST00000562722 A0A0A6YYD4 124 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 TRBV6-6A0A0A6YYG2 114 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 TMEM14DPA8MWL7 114 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 H3BUA1 57 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 SOCS1O15524 211 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 IFNA6P05013 189 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 SYNJ2BPP57105 145 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 LINC00205P59089 165 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 DEFA5Q01523 94 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 CBX3Q13185 183 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 ADAMTSL5Q6ZMM2 481 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 OR9G4Q8NGQ1 327 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 LPAR5Q9H1C0 372 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 SLC35D1Q9NTN3 355 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms