RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 ADTRPQ96IZ2 230 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 C2orf50Q96LR7 162 aa11.72□□□□□ -0.53
COMMD4-205ENST00000562310 MALRD1Q5VYJ5 2156 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 C22orf46C9J442 243 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 SLC31A2O15432 143 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 ENSAO43768 121 aaKnown RBP11.71□□□□□ -0.53
COMMD4-205ENST00000562310 ZNF16P17020 682 aaPredicted RBP11.71□□□□□ -0.53
COMMD4-205ENST00000562310 GNG10P50151 68 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 ZNF134P52741 427 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 ERVFRD-1P60508 538 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 FAM71F2Q6NXP2 309 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 SELENOHQ8IZQ5 122 aaKnown RBP11.71□□□□□ -0.53
COMMD4-205ENST00000562310 SLC35G3Q8N808 338 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 OR9G1Q8NH87 305 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 CLDND2Q8NHS1 167 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 LHFPL5Q8TAF8 219 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 TCTEX1D2Q8WW35 142 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 LEAP2Q969E1 77 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 S1PR3Q99500 378 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 TMEM133Q9H2Q1 129 aa11.71□□□□□ -0.53
COMMD4-205ENST00000562310 BEX4Q9NWD9 120 aaPredicted RBP11.71□□□□□ -0.53
COMMD4-205ENST00000562310 SAA2-SAA4A0A096LPE2 208 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 KIAA1324LA8MWY0 1029 aaPredicted RBP11.7□□□□□ -0.54
COMMD4-205ENST00000562310 VWC2LB2RUY7 222 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 SMLR1H3BR10 107 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 M0R1X1 148 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 RBFOX2O43251 390 aaKnown RBP eCLIP11.7□□□□□ -0.54
COMMD4-205ENST00000562310 PET100P0DJ07 73 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 SAA2P0DJI9 122 aaPredicted RBP11.7□□□□□ -0.54
COMMD4-205ENST00000562310 VDAC1P21796 283 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 IL3RAP26951 378 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 DUTP33316 252 aaKnown RBP11.7□□□□□ -0.54
COMMD4-205ENST00000562310 THBS3P49746 956 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 IAH1Q2TAA2 248 aaPredicted RBP11.7□□□□□ -0.54
COMMD4-205ENST00000562310 BTNL3Q6UXE8 466 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 LYG1Q8N1E2 194 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 MARVELD3Q96A59 401 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 PSMG3-AS1Q96PY0 264 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 GPHA2Q96T91 129 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 ONECUT1Q9UBC0 465 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 PRELID3BQ9Y3B1 194 aa11.7□□□□□ -0.54
COMMD4-205ENST00000562310 LRBAP50851 2863 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 G3V3Q6 166 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 J3QR06 171 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 FOXH1O75593 365 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 IGHV3-7P01780 117 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 LMO4P61968 165 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 THOC7Q6I9Y2 204 aaKnown RBP11.69□□□□□ -0.54
COMMD4-205ENST00000562310 C1orf122Q6ZSJ8 110 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 LYZL2Q7Z4W2 148 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 C11orf42Q8N5U0 333 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 ZBTB8BQ8NAP8 495 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-205ENST00000562310 PPP1R1CQ8WVI7 109 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 LSM10Q969L4 123 aaKnown RBP11.69□□□□□ -0.54
COMMD4-205ENST00000562310 PERPQ96FX8 193 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 SEC22AQ96IW7 307 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 OR10C1Q96KK4 312 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 ZFP57Q9NU63 452 aa11.69□□□□□ -0.54
COMMD4-205ENST00000562310 AKAP6Q13023 2319 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 A0A1W2PPE3 182 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 TOR1AO14656 332 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 SLC25A6P12236 298 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 SLC25A16P16260 332 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 COL8A1P27658 744 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 ZNF137PP52743 207 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 PRRX1P54821 245 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 RPL30P62888 115 aaKnown RBP11.68□□□□□ -0.54
COMMD4-205ENST00000562310 TAGLNQ01995 201 aaKnown RBP11.68□□□□□ -0.54
COMMD4-205ENST00000562310 RPL39P5Q59GN2 51 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 UTF1Q5T230 341 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 ZNF833PQ6ZTB9 187 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 FAM219AQ8IW50 185 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 ODF3L1Q8IXM7 274 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 SPAG16Q8N0X2 631 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 ABHD12Q8N2K0 398 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 BEND2Q8NDZ0 799 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 OR13D1Q8NGV5 346 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 OR10X1Q8NGY0 326 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 RNASE11Q8TAA1 199 aaKnown RBP11.68□□□□□ -0.54
COMMD4-205ENST00000562310 TMEM186Q96B77 213 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 ZNF251Q9BRH9 671 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 CLEC7AQ9BXN2 247 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 AMMECR1Q9Y4X0 333 aaPredicted RBP11.68□□□□□ -0.54
COMMD4-205ENST00000562310 KPTNQ9Y664 436 aa11.68□□□□□ -0.54
COMMD4-205ENST00000562310 USP9YO00507 2555 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-205ENST00000562310 IGHV2-26A0A0B4J1V2 119 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 IGHV2-70DA0A0C4DH43 119 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 LINC00473A8K010 186 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 HMSDA8MTL9 139 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 SLC25A4P12235 298 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 PSMB6P28072 239 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 LPAR6P43657 344 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 AKR1C2P52895 323 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 NKX2-5P52952 324 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-205ENST00000562310 ZNF585BQ52M93 769 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 NMSQ5H8A3 153 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 LRRC75A-AS1Q8N1F1 130 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 OR4S2Q8NH73 311 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 THAP6Q8TBB0 222 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 RRNAD1Q96FB5 475 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms