RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 ODAMA1E959 279 aa9.7□□□□□ -0.86
RPAP1-204ENST00000562303 A6NJY4 79 aa9.7□□□□□ -0.86
RPAP1-204ENST00000562303 H0Y980 276 aa9.7□□□□□ -0.86
RPAP1-204ENST00000562303 CA2P00918 260 aa9.7□□□□□ -0.86
RPAP1-204ENST00000562303 CD99P14209 185 aa9.7□□□□□ -0.86
RPAP1-204ENST00000562303 RELQ04864 619 aaPredicted RBP9.7□□□□□ -0.86
RPAP1-204ENST00000562303 ZNF56Q15929 161 aa9.7□□□□□ -0.86
RPAP1-204ENST00000562303 RBKSQ9H477 322 aa9.7□□□□□ -0.86
RPAP1-204ENST00000562303 OPN4Q9UHM6 478 aa9.7□□□□□ -0.86
RPAP1-204ENST00000562303 HOXB1P14653 301 aaPredicted RBP9.69□□□□□ -0.86
RPAP1-204ENST00000562303 DLX6P56179 175 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 SLC16A13Q7RTY0 426 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 POM121Q96HA1 1249 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 CLEC7AQ9BXN2 247 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 GLI3P10071 1580 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 SYNGR3O43761 229 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 TSPAN2O60636 221 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 REG1AP05451 166 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 ACAA1P09110 424 aaPredicted RBP9.69□□□□□ -0.86
RPAP1-204ENST00000562303 SEC11BP0C7V7 166 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 NPPCP23582 126 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 STARD6P59095 220 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 GPR82Q96P67 336 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 NHSQ6T4R5 1651 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 LAMB1P07942 1786 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 ASAH2BP0C7U1 165 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 LGALS3P17931 250 aaKnown RBP9.69□□□□□ -0.86
RPAP1-204ENST00000562303 IBA57Q5T440 356 aaKnown RBP9.69□□□□□ -0.86
RPAP1-204ENST00000562303 OR9G1Q8NH87 305 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 PTP4A3O75365 173 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 PRSS2P07478 247 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 CIRBPQ14011 172 aaKnown RBP9.69□□□□□ -0.86
RPAP1-204ENST00000562303 RSPO4Q2I0M5 234 aaPredicted RBP9.69□□□□□ -0.86
RPAP1-204ENST00000562303 SGMS2Q8NHU3 365 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 LEAP2Q969E1 77 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 ELOVL1Q9BW60 279 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 DSPPQ9NZW4 1301 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 ZNF25P17030 456 aaPredicted RBP9.69□□□□□ -0.86
RPAP1-204ENST00000562303 CXCL3P19876 107 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 RUNX1Q01196 453 aa9.69□□□□□ -0.86
RPAP1-204ENST00000562303 DIRC3C9JPN6 131 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 ISG15P05161 165 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 KLF14Q8TD94 323 aaPredicted RBP9.68□□□□□ -0.86
RPAP1-204ENST00000562303 PAM16Q9Y3D7 125 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 HS3ST3B1Q9Y662 390 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 V9GYH0 126 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 KIF13AQ9H1H9 1805 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 LOC107984156A0A0G2JMH3 177 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 B9A039 149 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 FXYD3Q14802 87 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 DNM1P46Q6ZS02 220 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 ARL17AQ8IVW1 177 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 H1FOOQ8IZA3 346 aaPredicted RBP9.68□□□□□ -0.86
RPAP1-204ENST00000562303 LHFPL5Q8TAF8 219 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 NPIPB11E5RHQ5 1161 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 NPFFO15130 113 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 NDUFB4O95168 129 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 COMPP49747 757 aaPredicted RBP9.68□□□□□ -0.86
RPAP1-204ENST00000562303 SERF2P84101 59 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 CBLN2Q8IUK8 224 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 PGLYRP4Q96LB8 373 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 ELOVL5Q9NYP7 299 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 RALYQ9UKM9 306 aaKnown RBP9.68□□□□□ -0.86
RPAP1-204ENST00000562303 A0A1W2PPC1 479 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 RCC1P18754 421 aaPredicted RBP9.68□□□□□ -0.86
RPAP1-204ENST00000562303 RPS20P60866 119 aaKnown RBP9.68□□□□□ -0.86
RPAP1-204ENST00000562303 LBHQ53QV2 105 aaPredicted RBP9.68□□□□□ -0.86
RPAP1-204ENST00000562303 MAP1LC3AQ9H492 121 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 TNFSF18Q9UNG2 199 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 ITGB4P16144 1822 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 SCN9AQ15858 1988 aa9.68□□□□□ -0.86
RPAP1-204ENST00000562303 FBLL1A6NHQ2 334 aaKnown RBP9.67□□□□□ -0.86
RPAP1-204ENST00000562303 BCL2P10415 239 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 NANOS3P60323 173 aaKnown RBP9.67□□□□□ -0.86
RPAP1-204ENST00000562303 MIC13Q5XKP0 118 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 MIXL1Q9H2W2 232 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 C17orf51A8MQB3 221 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 RBFOX2O43251 390 aaKnown RBP eCLIP9.67□□□□□ -0.86
RPAP1-204ENST00000562303 NUTF2P61970 127 aaKnown RBP9.67□□□□□ -0.86
RPAP1-204ENST00000562303 FAM209AQ5JX71 171 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 COPS9Q8WXC6 57 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 KCNK17Q96T54 332 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 QTRT1Q9BXR0 403 aaKnown RBP9.67□□□□□ -0.86
RPAP1-204ENST00000562303 GEMIN7Q9H840 131 aaKnown RBP9.67□□□□□ -0.86
RPAP1-204ENST00000562303 PLAC1Q9HBJ0 212 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 MRPS16Q9Y3D3 137 aaKnown RBP9.67□□□□□ -0.86
RPAP1-204ENST00000562303 A0A087X0M5 115 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 A0A1B0GX30 115 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 GDF9O60383 454 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 COX6A1P12074 109 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 HIST1H1AQ02539 215 aaPredicted RBP9.67□□□□□ -0.86
RPAP1-204ENST00000562303 SLC25A47Q6Q0C1 308 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 PKIBQ9C010 78 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 FOXD3Q9UJU5 478 aaPredicted RBP9.67□□□□□ -0.86
RPAP1-204ENST00000562303 DOCK1Q14185 1865 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 LSM10Q969L4 123 aaKnown RBP9.67□□□□□ -0.86
RPAP1-204ENST00000562303 SGK494Q96LW2 274 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 DNAJC13O75165 2243 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 UNC119Q13432 240 aa9.67□□□□□ -0.86
RPAP1-204ENST00000562303 OR13C6PQ8NH95 151 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms