RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 MS4A10Q96PG2 267 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 CLCC1Q96S66 551 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 GHITMQ9H3K2 345 aa12.85□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 TRBV6-6A0A0A6YYG2 114 aa12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 EBAG9O00559 213 aa12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 RBBP9O75884 186 aa12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 CA2P00918 260 aa12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 IGKV1-16P04430 117 aa12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 SRMP19623 302 aa12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 LINC00205P59089 165 aa12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 TMEM267Q0VDI3 215 aaPredicted RBP12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 PSG5Q15238 335 aa12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 AKIRIN2Q53H80 203 aa12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 UNQ5815/PRO19632Q6UWF5 114 aa12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 DRAXINQ8NBI3 349 aaPredicted RBP12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 C11orf54Q9H0W9 315 aaPredicted RBP12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 LPAR5Q9H1C0 372 aa12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 PLEKHJ1Q9NW61 149 aa12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 METTL1Q9UBP6 276 aaKnown RBP12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 AK3Q9UIJ7 227 aa12.84□□□□□ -0.35
VPS9D1-AS1-201ENST00000562298 TENM2Q9NT68 2774 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 SORL1Q92673 2214 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 SOCS1O15524 211 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 HSPB1P04792 205 aaKnown RBP12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 CEACAM6P40199 344 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 TPPP2P59282 170 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 HLA-DRB3P79483 266 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 PITPNAQ00169 270 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 RCN1Q15293 331 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 HSD17B12Q53GQ0 312 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 ZNF562Q6V9R5 426 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 CEACAM19Q7Z692 300 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 HAPLN4Q86UW8 402 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 RHOVQ96L33 236 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 GFI1Q99684 422 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 RNF5Q99942 180 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 MND1Q9BWT6 205 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 RNF150Q9ULK6 438 aa12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 LSM2Q9Y333 95 aaKnown RBP12.83□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 FOXI3A8MTJ6 420 aaPredicted RBP12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 BPNT1O95861 308 aa12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 CDK1P06493 297 aa12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 SCTP09683 121 aa12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 UCHL1P09936 223 aa12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 ZBTB25P24278 435 aa12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 SRSF7Q16629 238 aaKnown RBP eCLIP12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 RNLSQ5VYX0 342 aa12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 FAM89BQ8N5H3 189 aa12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 ZNF383Q8NA42 475 aa12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 OR6M1Q8NGM8 313 aa12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 EDARADDQ8WWZ3 215 aa12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 FLYWCH2Q96CP2 140 aaKnown RBP12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 RIMS4Q9H426 269 aaPredicted RBP12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 SLA2Q9H6Q3 261 aa12.82□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 EPPK1P58107 5090 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 IGKV1-6A0A0C4DH72 117 aa12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 ARPC1BO15143 372 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 HSPA12AO43301 675 aa12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 TFAP2AP05549 437 aa12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 CPEP16870 476 aa12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 SSBP2P81877 361 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 P2RY14Q15391 338 aa12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 OGFRL1Q5TC84 451 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 Q8N1Y9 231 aa12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 PTX4Q96A99 478 aa12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 OR4C12Q96R67 309 aa12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 ZMAT4Q9H898 229 aa12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 Q9N2K0 584 aa12.81□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 SPDEFO95238 335 aa12.8□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 IGLV1-51P01701 117 aa12.8□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 TRGV3P03979 118 aa12.8□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 ARSBP15848 533 aa12.8□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 TMEM50BP56557 158 aa12.8□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 SPHARQ15513 63 aa12.8□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 GRPEL2Q8TAA5 225 aa12.8□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 TSNAXQ99598 290 aaKnown RBP12.8□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 TM2D3Q9BRN9 247 aa12.8□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 C12orf4Q9NQ89 552 aa12.8□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 GAR1Q9NY12 217 aaKnown RBP12.8□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 HSF4Q9ULV5 492 aa12.8□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 PTGES3LE9PB15 166 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 SLC17A2O00624 439 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 CASQ2O14958 399 aaPredicted RBP12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 SLC25A17O43808 307 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 IGHV4-30-4P0DP06 118 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 LYL1P12980 280 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 CD40LGP29965 261 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 RPS16P62249 146 aaKnown RBP12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 FXYD3Q14802 87 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 MED22Q15528 200 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 LIPKQ5VXJ0 399 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 TMEM91Q6ZNR0 172 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 PDPNQ86YL7 162 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 TMEM203Q969S6 136 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 ARHGAP5-AS1Q96IT6 56 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 URM1Q9BTM9 101 aaKnown RBP12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 PECRQ9BY49 303 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 MGAT4AQ9UM21 535 aa12.79□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 VEGFCP49767 419 aa12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 PJVKQ0ZLH3 352 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms