RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 ADIPOR1Q96A54 375 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 H0YIG0 161 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 NXPH3O95157 252 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 CBLN1P23435 193 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 NBL1P41271 181 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 NXPH1P58417 271 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 HERV-K104P61576 105 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 STUMQ69YW2 141 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 TMEM186Q96B77 213 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 WNT10AQ9GZT5 417 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 HS3ST3A1Q9Y663 406 aa15.88■□□□□ 0.13
RAB40C-206ENST00000561781 MS4A18H0YCH9 400 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 LRRC75BQ2VPJ9 315 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 MS4A18Q3C1V0 323 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 C19orf35Q6ZS72 473 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 VASH2Q86V25 355 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 GPR27Q9NS67 375 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 CEP250Q9BV73 2442 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 RALGAPA1Q6GYQ0 2036 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 SIRPB1O00241 398 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 S1PR2O95136 353 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 C3orf79P0CE67 100 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 VDAC1P21796 283 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 SCGB2A2Q13296 93 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 NMSQ5H8A3 153 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 ERASQ7Z444 233 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 BATF2Q8N1L9 274 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 KCNS1Q96KK3 526 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 MRPL13Q9BYD1 178 aaKnown RBP15.87■□□□□ 0.13
RAB40C-206ENST00000561781 CHODLQ9H9P2 273 aa15.87■□□□□ 0.13
RAB40C-206ENST00000561781 OR2T8A6NH00 312 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 F2Z2F3 143 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 SAP30O75446 220 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 POU3F1Q03052 451 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-206ENST00000561781 HIST3H3Q16695 136 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 WDR73Q6P4I2 378 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 DEFB125Q8N687 156 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 LIN37Q96GY3 246 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-206ENST00000561781 LOC102725191A0A1B0GVB3 256 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 GJE1A6NN92 205 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 MYF5P13349 255 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 PGCP20142 388 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 DUSP3P51452 185 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-206ENST00000561781 PPP1CAP62136 330 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 PRTGQ2VWP7 1150 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 HLA-BQ31612 363 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 PEAR1Q5VY43 1037 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-206ENST00000561781 SFRP2Q96HF1 295 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 RAB40CQ96S21 281 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 LHFPL6Q9Y693 200 aa15.86■□□□□ 0.13
RAB40C-206ENST00000561781 TRAV9-2A0A087WT02 112 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 MDFIC2A0A1B0GVS7 189 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 FCGR2AP12318 317 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 MLF1P58340 268 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 TMEM267Q0VDI3 215 aaPredicted RBP15.85■□□□□ 0.13
RAB40C-206ENST00000561781 HLA-DRB5Q30154 266 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 OR10J3Q5JRS4 329 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 PLA2G2CQ5R387 149 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 ZNF525Q8N782 197 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 SPSB1Q96BD6 273 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 EMC6Q9BV81 110 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 LRRC61Q9BV99 259 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 KLHL13Q9P2N7 655 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 CDIPTO14735 213 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 KITLGP21583 273 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 DAP3P51398 398 aaKnown RBP15.85■□□□□ 0.13
RAB40C-206ENST00000561781 TLE1Q04724 770 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 ASCL4Q6XD76 172 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 DOK3Q7L591 496 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 RPP25LQ8N5L8 163 aaKnown RBP15.85■□□□□ 0.13
RAB40C-206ENST00000561781 FER1L6-AS1Q8NA97 138 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 OR2M3Q8NG83 312 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 MYO7BQ6PIF6 2116 aa15.85■□□□□ 0.13
RAB40C-206ENST00000561781 TRBV9A0A0B4J1U6 114 aa15.84■□□□□ 0.13
RAB40C-206ENST00000561781 FCN1O00602 326 aa15.84■□□□□ 0.13
RAB40C-206ENST00000561781 CCL1P22362 96 aa15.84■□□□□ 0.13
RAB40C-206ENST00000561781 PSG3Q16557 428 aa15.84■□□□□ 0.13
RAB40C-206ENST00000561781 OR4P4Q8NGL7 312 aa15.84■□□□□ 0.13
RAB40C-206ENST00000561781 BORCS7Q96B45 105 aa15.84■□□□□ 0.13
RAB40C-206ENST00000561781 GNB4Q9HAV0 340 aa15.84■□□□□ 0.13
RAB40C-206ENST00000561781 CTXND1A0A1B0GTU2 59 aa15.84■□□□□ 0.13
RAB40C-206ENST00000561781 E9PLN8 166 aa15.84■□□□□ 0.13
RAB40C-206ENST00000561781 HBG1P69891 147 aa15.84■□□□□ 0.13
RAB40C-206ENST00000561781 HBG2P69892 147 aa15.84■□□□□ 0.13
RAB40C-206ENST00000561781 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.84■□□□□ 0.13
RAB40C-206ENST00000561781 PATE1Q8WXA2 126 aa15.84■□□□□ 0.13
RAB40C-206ENST00000561781 Q96M66 194 aa15.84■□□□□ 0.13
RAB40C-206ENST00000561781 WDR61Q9GZS3 305 aaKnown RBP15.84■□□□□ 0.13
RAB40C-206ENST00000561781 ASCC3Q8N3C0 2202 aaKnown RBP15.84■□□□□ 0.13
RAB40C-206ENST00000561781 PCDH15Q96QU1 1955 aa15.83■□□□□ 0.13
RAB40C-206ENST00000561781 FREM2Q5SZK8 3169 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 A0A0J9YY10 115 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 H3BP45 60 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 YPEL5P62699 121 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 ZNF90Q03938 601 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 SLC23A3Q6PIS1 610 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 OR10P1Q8NGE3 313 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 ZNF721Q8TF20 911 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 SHANK1Q9Y566 2161 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 A0A1W2PS18 150 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms