RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 SMIM4Q8WVI0 70 aa13.13□□□□□ -0.31
USB1-204ENST00000561568 AKR1E2Q96JD6 320 aa13.13□□□□□ -0.31
USB1-204ENST00000561568 OR2D2Q9H210 308 aa13.13□□□□□ -0.31
USB1-204ENST00000561568 EHFQ9NZC4 300 aa13.13□□□□□ -0.31
USB1-204ENST00000561568 PROP1O75360 226 aa13.12□□□□□ -0.31
USB1-204ENST00000561568 SNRNP70P08621 437 aaKnown RBP13.12□□□□□ -0.31
USB1-204ENST00000561568 TBPP20226 339 aa13.12□□□□□ -0.31
USB1-204ENST00000561568 HRH1P35367 487 aa13.12□□□□□ -0.31
USB1-204ENST00000561568 TSPAN5P62079 268 aa13.12□□□□□ -0.31
USB1-204ENST00000561568 DGCR2P98153 550 aa13.12□□□□□ -0.31
USB1-204ENST00000561568 HES1Q14469 280 aa13.12□□□□□ -0.31
USB1-204ENST00000561568 KRTAP24-1Q3LI83 254 aa13.12□□□□□ -0.31
USB1-204ENST00000561568 RPL39P5Q59GN2 51 aa13.12□□□□□ -0.31
USB1-204ENST00000561568 RNASE12Q5GAN4 147 aaKnown RBP13.12□□□□□ -0.31
USB1-204ENST00000561568 LINC00299Q6ZSB3 139 aa13.12□□□□□ -0.31
USB1-204ENST00000561568 TMEM229BQ8NBD8 167 aa13.12□□□□□ -0.31
USB1-204ENST00000561568 RBM14Q96PK6 669 aaKnown RBP13.12□□□□□ -0.31
USB1-204ENST00000561568 NABP2Q9BQ15 211 aa13.12□□□□□ -0.31
USB1-204ENST00000561568 SDHAF2Q9NX18 166 aa13.12□□□□□ -0.31
USB1-204ENST00000561568 RNF212BA8MTL3 300 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 J3QRK9 145 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 MOSP00540 346 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 PPYP01298 95 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 IGKV1D-33P01593 117 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 IGKV1-33P01594 117 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 IFNA6P05013 189 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 CSF1P09603 554 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 CT45A6P0DMU7 189 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 CT45A5P0DMU8 189 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 CT45A7P0DMV0 189 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 HKR1P10072 659 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 AADACP22760 399 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 TAS2R19P59542 299 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 TAGLNQ01995 201 aaKnown RBP13.11□□□□□ -0.31
USB1-204ENST00000561568 CNPY1Q3B7I2 92 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 PYDC2Q56P42 97 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 VAX1Q5SQQ9 334 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 DHRS7BQ6IAN0 325 aaPredicted RBP13.11□□□□□ -0.31
USB1-204ENST00000561568 TMEM17Q86X19 198 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 ZNF645Q8N7E2 425 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 BORCS5Q969J3 196 aa13.11□□□□□ -0.31
USB1-204ENST00000561568 THAP7Q9BT49 309 aaPredicted RBP13.11□□□□□ -0.31
USB1-204ENST00000561568 MRPL20Q9BYC9 149 aaKnown RBP13.11□□□□□ -0.31
USB1-204ENST00000561568 RBMX2Q9Y388 322 aaKnown RBP13.11□□□□□ -0.31
USB1-204ENST00000561568 IGHV3-72A0A0B4J1Y9 119 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 OR5H14A6NHG9 310 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 M0QZK8 103 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 M0R1X1 148 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 OR2F2O95006 317 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 TMEM11P17152 192 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 LSAMPQ13449 338 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 MSMO1Q15800 293 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 RNASE10Q5GAN6 216 aaKnown RBP13.1□□□□□ -0.31
USB1-204ENST00000561568 ZNF660Q6AZW8 331 aaPredicted RBP13.1□□□□□ -0.31
USB1-204ENST00000561568 TMEM219Q86XT9 240 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.1□□□□□ -0.31
USB1-204ENST00000561568 ZBTB34Q8NCN2 500 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 OR5AN1Q8NGI8 311 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 ADTRPQ96IZ2 230 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 EAF1Q96JC9 268 aaPredicted RBP13.1□□□□□ -0.31
USB1-204ENST00000561568 ZNF2Q9BSG1 426 aaPredicted RBP13.1□□□□□ -0.31
USB1-204ENST00000561568 NPFFR1Q9GZQ6 430 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 V9GYH0 126 aa13.1□□□□□ -0.31
USB1-204ENST00000561568 CUBNO60494 3623 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 TMEM89A2RUT3 159 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 NDUFA7O95182 113 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 CD3DP04234 171 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 HERV-K104P61576 105 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 FOXL1Q12952 345 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 HNF4GQ14541 408 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 LPCAT3Q6P1A2 487 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 Q8N402 240 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 DRAXINQ8NBI3 349 aaPredicted RBP13.09□□□□□ -0.31
USB1-204ENST00000561568 OR8H1Q8NGG4 311 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 SECTM1Q8WVN6 248 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 RNF5Q99942 180 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 SLC25A33Q9BSK2 321 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 C19orf24Q9BVV8 132 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 SLC5A7Q9GZV3 580 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 C1RLQ9NZP8 487 aa13.09□□□□□ -0.31
USB1-204ENST00000561568 IGKV1D-13A0A0B4J2D9 117 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 A0A1B0GUS0 222 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 TSPAN9O75954 239 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 RAB3DO95716 219 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 CD74P04233 296 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 IGKV1-13P0DP09 117 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 THBS3P49746 956 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 ZNF45Q02386 682 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 MEF2DQ14814 521 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 STEAP1BQ6NZ63 245 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 ARRDC1Q8N5I2 433 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 OR4F5Q8NH21 305 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 MOB3AQ96BX8 217 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 RANBP3Q9H6Z4 567 aaPredicted RBP13.08□□□□□ -0.32
USB1-204ENST00000561568 WASHC3Q9Y3C0 194 aa13.08□□□□□ -0.32
USB1-204ENST00000561568 H0YJW9 148 aa13.07□□□□□ -0.32
USB1-204ENST00000561568 H7C2Y5 167 aa13.07□□□□□ -0.32
USB1-204ENST00000561568 M0QYG6 137 aa13.07□□□□□ -0.32
USB1-204ENST00000561568 CHST1O43916 411 aa13.07□□□□□ -0.32
USB1-204ENST00000561568 APOA2P02652 100 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms