RNA–Protein interactions for RNA: ENST00000560985.5

TICRR-202, Transcript of TOPBP1 interacting checkpoint and replication regulator, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TICRR, Length 6,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TICRR-202ENST00000560985 CHODLQ9H9P2 273 aa12.15□□□□□ -0.46
TICRR-202ENST00000560985 ZFP64Q9NPA5 681 aa12.15□□□□□ -0.46
TICRR-202ENST00000560985 SCTP09683 121 aa12.15□□□□□ -0.47
TICRR-202ENST00000560985 SAA1P0DJI8 122 aaPredicted RBP12.15□□□□□ -0.47
TICRR-202ENST00000560985 FOXA3P55318 350 aaPredicted RBP12.15□□□□□ -0.47
TICRR-202ENST00000560985 LCN2P80188 198 aa12.15□□□□□ -0.47
TICRR-202ENST00000560985 MEF2BQ02080 365 aaPredicted RBP12.15□□□□□ -0.47
TICRR-202ENST00000560985 MARVELD3Q96A59 401 aa12.15□□□□□ -0.47
TICRR-202ENST00000560985 ZNF414Q96IQ9 312 aa12.15□□□□□ -0.47
TICRR-202ENST00000560985 SCNM1Q9BWG6 230 aa12.15□□□□□ -0.47
TICRR-202ENST00000560985 IGHV3-23P01764 117 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 ZNF660Q6AZW8 331 aaPredicted RBP12.14□□□□□ -0.47
TICRR-202ENST00000560985 C1orf210Q8IVY1 113 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 DUX5Q96PT3 197 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 TOMM7Q9P0U1 55 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 TRBV7-9A0A0J9YWB2 115 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 IGLV3-27P01718 113 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 MRGPRX3Q96LB0 322 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 IMMP2LQ96T52 175 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 HEXA-AS1Q9H8Q6 139 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 TMEM30AQ9NV96 361 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 NUP205Q92621 2012 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 LRRC37A3O60309 1634 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 C10orf128Q5T292 105 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 TMEM101Q96IK0 257 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 DNAJC4Q9NNZ3 241 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 TRIP11Q15643 1979 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 ERVH48-1M5A8F1 160 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 HBBP68871 147 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 SRSF4Q08170 494 aaKnown RBP12.14□□□□□ -0.47
TICRR-202ENST00000560985 CD300LDQ6UXZ3 194 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 KCNE5Q9UJ90 142 aa12.14□□□□□ -0.47
TICRR-202ENST00000560985 ZNFX1Q9P2E3 1918 aaKnown RBP12.14□□□□□ -0.47
TICRR-202ENST00000560985 HPRT1P00492 218 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 CFDP00746 253 aaPredicted RBP12.13□□□□□ -0.47
TICRR-202ENST00000560985 NMBP08949 121 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 MAJINQ3KP22 176 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 RFLNBQ8N5W9 214 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 CCL13Q99616 98 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 KLHDC2Q9Y2U9 406 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 N4BP2Q86UW6 1770 aaPredicted RBP12.13□□□□□ -0.47
TICRR-202ENST00000560985 RGPD2P0DJD1 1756 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 HRKO00198 91 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 LINC00614P0C842 121 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 RND3P61587 244 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 SERF2P84101 59 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 HOGA1Q86XE5 327 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 LURAP1LQ8IV03 231 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 H3BUT2 72 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 ZNF645Q8N7E2 425 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 TMEM174Q8WUU8 243 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 NFAM1Q8NET5 270 aaPredicted RBP12.13□□□□□ -0.47
TICRR-202ENST00000560985 LEAP2Q969E1 77 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 PSMG3Q9BT73 122 aaPredicted RBP12.13□□□□□ -0.47
TICRR-202ENST00000560985 SLX4Q8IY92 1834 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 SPTY2D1-AS1A0A0U1RR47 76 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 K7N7A8 449 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 SMAD7O15105 426 aaKnown RBP12.13□□□□□ -0.47
TICRR-202ENST00000560985 GABRG2P18507 467 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 SRD5A2P31213 254 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 WDR54Q9H977 334 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 GSN-AS1Q9NRJ2 163 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 TMEM91Q6ZNR0 172 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 TTC3P53804 2025 aa12.13□□□□□ -0.47
TICRR-202ENST00000560985 LIPT2A6NK58 231 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 TMEM229AB2RXF0 380 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 LMO7DNF2Z398 122 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 IL9P15248 144 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 FCARP24071 287 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 FHITP49789 147 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 KIAA0040Q15053 153 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 TMEM252Q8N6L7 170 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 CISD1Q9NZ45 108 aaKnown RBP12.12□□□□□ -0.47
TICRR-202ENST00000560985 CCDC88CQ9P219 2028 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 FOXI3A8MTJ6 420 aaPredicted RBP12.12□□□□□ -0.47
TICRR-202ENST00000560985 TCF24Q7RTU0 167 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 MDP1Q86V88 176 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 TAF15Q92804 592 aaKnown RBP eCLIP12.12□□□□□ -0.47
TICRR-202ENST00000560985 HIST1H2BAQ96A08 127 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 GAPDHP04406 335 aaKnown RBP12.12□□□□□ -0.47
TICRR-202ENST00000560985 RPL31P62899 125 aaKnown RBP12.12□□□□□ -0.47
TICRR-202ENST00000560985 PEAR1Q5VY43 1037 aaPredicted RBP12.12□□□□□ -0.47
TICRR-202ENST00000560985 AICDAQ9GZX7 198 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 SERGEFQ9UGK8 458 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 ANKRD36CQ5JPF3 1778 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 GOLT1AQ6ZVE7 132 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 FAM19A2Q8N3H0 131 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 TEX29Q8N6K0 151 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 KIR2DL4Q99706 377 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.12□□□□□ -0.47
TICRR-202ENST00000560985 RPL27AP46776 148 aaKnown RBP12.12□□□□□ -0.47
TICRR-202ENST00000560985 ZPLD1Q8TCW7 415 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 KIF13AQ9H1H9 1805 aa12.12□□□□□ -0.47
TICRR-202ENST00000560985 DICER1Q9UPY3 1922 aaKnown RBP12.12□□□□□ -0.47
TICRR-202ENST00000560985 LILRA5A6NI73 299 aa12.11□□□□□ -0.47
TICRR-202ENST00000560985 TNFSF14O43557 240 aa12.11□□□□□ -0.47
TICRR-202ENST00000560985 COX6B1P14854 86 aa12.11□□□□□ -0.47
TICRR-202ENST00000560985 GLIPR1P48060 266 aa12.11□□□□□ -0.47
TICRR-202ENST00000560985 CT55Q8WUE5 264 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms