RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 OR1A1Q9P1Q5 309 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 RABL2AQ9UBK7 228 aaPredicted RBP8.5□□□□□ -1.05
TPM1-227ENST00000560970 RABL2BQ9UNT1 228 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 MOB4Q9Y3A3 225 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 IGHV3-72A0A0B4J1Y9 119 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 PSMB11A5LHX3 300 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 FAM90A9PA6NNJ1 464 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 OOSP1A8MZH6 123 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 HPGDSO60760 199 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 APOA1P02647 267 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 AMY1AP04745 511 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 AMY2AP04746 511 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 SNRNP70P08621 437 aaKnown RBP8.49□□□□□ -1.05
TPM1-227ENST00000560970 CD3GP09693 182 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 TALDO1P37837 337 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 MNDAP41218 407 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 ZNF137PP52743 207 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 DEFA1P59665 94 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 DEFA3P59666 94 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 ZNF79Q15937 498 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 CCDC144NLQ6NUI1 221 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 C10orf99Q6UWK7 81 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 LYSMD2Q8IV50 215 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 IL1F10Q8WWZ1 152 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 GALMQ96C23 342 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 SOSTQ9BQB4 213 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 SRRQ9GZT4 340 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 IFI27L2Q9H2X8 130 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 RIMS4Q9H426 269 aaPredicted RBP8.49□□□□□ -1.05
TPM1-227ENST00000560970 ZNF230Q9UIE0 474 aaPredicted RBP8.49□□□□□ -1.05
TPM1-227ENST00000560970 ETV7Q9Y603 341 aa8.49□□□□□ -1.05
TPM1-227ENST00000560970 IGKV1D-8A0A087WSZ0 117 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 IGHV1-3A0A0C4DH29 117 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 METTL21EPA6NDL7 271 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 TMEM235A6NFC5 223 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 SH2D7A6NKC9 451 aaPredicted RBP8.48□□□□□ -1.05
TPM1-227ENST00000560970 SERPINE3A8MV23 424 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 ST8SIA5O15466 376 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 YPEL1O60688 119 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 PTTG1O95997 202 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 SLC6A1P30531 599 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 RAB7AP51149 207 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 RPL23AP62750 156 aaKnown RBP8.48□□□□□ -1.05
TPM1-227ENST00000560970 IFITM3Q01628 133 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 ZNF260Q3ZCT1 412 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 DEFB121Q5J5C9 76 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 C9orf152Q5JTZ5 239 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 STEAP3Q658P3 488 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 Q6ZNX1 250 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 MRPL41Q8IXM3 137 aaKnown RBP8.48□□□□□ -1.05
TPM1-227ENST00000560970 IZUMO1Q8IYV9 350 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 OR8H3Q8N146 312 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 SAMD12Q8N8I0 201 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 NUDCD2Q8WVJ2 157 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 RTN4IP1Q8WWV3 396 aaPredicted RBP8.48□□□□□ -1.05
TPM1-227ENST00000560970 YPEL2Q96QA6 119 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 SDHCQ99643 169 aaPredicted RBP8.48□□□□□ -1.05
TPM1-227ENST00000560970 CABLES2Q9BTV7 478 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 MCRIP2Q9BUT9 160 aaKnown RBP8.48□□□□□ -1.05
TPM1-227ENST00000560970 EXTL2Q9UBQ6 330 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 SLC23A1Q9UHI7 598 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 SPATA2Q9UM82 520 aa8.48□□□□□ -1.05
TPM1-227ENST00000560970 FAM25AB3EWG3 89 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 FAM25CB3EWG5 89 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 FAM25GB3EWG6 89 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 ZNF736B4DX44 427 aaPredicted RBP8.47□□□□□ -1.05
TPM1-227ENST00000560970 TRDCB7Z8K6 153 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 SSX5O60225 188 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 IGKV1D-33P01593 117 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 IGKV1-33P01594 117 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 ELK1P19419 428 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 IL3RAP26951 378 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 THBS3P49746 956 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 ARFRP1Q13795 201 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 OXA1LQ15070 435 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 TRIM16LQ309B1 348 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 CDNFQ49AH0 187 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 UBE2NLQ5JXB2 153 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 LY6G6FQ5SQ64 297 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 MOB3BQ86TA1 216 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 CENPSQ8N2Z9 138 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 MRPL20Q9BYC9 149 aaKnown RBP8.47□□□□□ -1.05
TPM1-227ENST00000560970 MGAT4AQ9UM21 535 aa8.47□□□□□ -1.05
TPM1-227ENST00000560970 SAA2-SAA4A0A096LPE2 208 aa8.46□□□□□ -1.06
TPM1-227ENST00000560970 NUDT19A8MXV4 375 aa8.46□□□□□ -1.06
TPM1-227ENST00000560970 FABP7O15540 132 aa8.46□□□□□ -1.06
TPM1-227ENST00000560970 LANCL1O43813 399 aa8.46□□□□□ -1.06
TPM1-227ENST00000560970 TPPPO94811 219 aa8.46□□□□□ -1.06
TPM1-227ENST00000560970 HLA-DQB1P01920 261 aa8.46□□□□□ -1.06
TPM1-227ENST00000560970 GAPDHP04406 335 aaKnown RBP8.46□□□□□ -1.06
TPM1-227ENST00000560970 EIF4EP06730 217 aaKnown RBP8.46□□□□□ -1.06
TPM1-227ENST00000560970 GSTT2P0CG29 244 aa8.46□□□□□ -1.06
TPM1-227ENST00000560970 GSTT2BP0CG30 244 aa8.46□□□□□ -1.06
TPM1-227ENST00000560970 FAM106CPP0CH98 169 aa8.46□□□□□ -1.06
TPM1-227ENST00000560970 SAA2P0DJI9 122 aaPredicted RBP8.46□□□□□ -1.06
TPM1-227ENST00000560970 PTHLHP12272 177 aa8.46□□□□□ -1.06
TPM1-227ENST00000560970 IL7P13232 177 aa8.46□□□□□ -1.06
TPM1-227ENST00000560970 OR3A3P47888 321 aa8.46□□□□□ -1.06
TPM1-227ENST00000560970 MRPS15P82914 257 aaKnown RBP8.46□□□□□ -1.06
TPM1-227ENST00000560970 PITPNAQ00169 270 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms