RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 H3BUX3 64 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 FCGR3AP08637 254 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 HKR1P10072 659 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 TBPP20226 339 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 CBX5P45973 191 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 COMPP49747 757 aaPredicted RBP11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 FOXL1Q12952 345 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 MEF2DQ14814 521 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 LTC4SQ16873 150 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 FAM71F2Q6NXP2 309 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 C16orf82Q7Z2V1 217 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 TCTE3Q8IZS6 198 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 ZNF439Q8NDP4 499 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 OR1L1Q8NH94 360 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 SPATA3Q8NHX4 192 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 C17orf50Q8WW18 174 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 SNAPC3Q92966 411 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 TOMM40LQ969M1 308 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 GINS4Q9BRT9 223 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 CHIAQ9BZP6 476 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 RANGRFQ9HD47 186 aaPredicted RBP11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 SLC2A8Q9NY64 477 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 TCF19Q9Y242 345 aa11.29□□□□□ -0.6
PKNOX1-209ENST00000560448 TMEM89A2RUT3 159 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 FAM172BPA6NC97 362 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 GAPDHP04406 335 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 AMY2AP04746 511 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 CTXN2P0C2S0 81 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 VSIG10L2P0DP72 767 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 GNG10P50151 68 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 ZNF816Q0VGE8 651 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 FCN2Q15485 313 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 LDLRAD2Q5SZI1 272 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 GLDNQ6ZMI3 551 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 THNSL2Q86YJ6 484 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 BEST4Q8NFU0 473 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 OR2AK2Q8NG84 335 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 IL1F10Q8WWZ1 152 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 AKR1E2Q96JD6 320 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 FYTTD1Q96QD9 318 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 ABHD14AQ9BUJ0 271 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 TOLLIPQ9H0E2 274 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 MED28Q9H204 178 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 RANBP3Q9H6Z4 567 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 BEX1Q9HBH7 125 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 IFT46Q9NQC8 304 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 PIPOXQ9P0Z9 390 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 HILPDAQ9Y5L2 63 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 ATRQ13535 2644 aa11.28□□□□□ -0.6
PKNOX1-209ENST00000560448 FAM181BA6NEQ2 426 aa11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 FABP7O15540 132 aa11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 GPR137BO60478 399 aa11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 NDUFA7O95182 113 aa11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 SULT1A3P0DMM9 295 aa11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 SULT1A4P0DMN0 295 aa11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 ANXA7P20073 488 aaKnown RBP11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 CD83Q01151 205 aa11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 RNASE10Q5GAN6 216 aaKnown RBP11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 HOGA1Q86XE5 327 aa11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 OR11H7Q8NGC8 314 aa11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 OR13C8Q8NGS7 320 aa11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 DUX5Q96PT3 197 aa11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 SLC25A21Q9BQT8 299 aaPredicted RBP11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 HDHD3Q9BSH5 251 aaPredicted RBP11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 CABLES2Q9BTV7 478 aa11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 ALX4Q9H161 411 aaPredicted RBP11.27□□□□□ -0.6
PKNOX1-209ENST00000560448 IGHV3-43A0A0B4J1X8 118 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 SNRPGP15A8MWD9 76 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 DISC1C4P0D8 188 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 HSD17B6O14756 317 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 HSPA12AO43301 675 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 FAM106CPP0CH98 169 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 IGHV3-43DP0DP04 118 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 CBX3Q13185 183 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 HABP2Q14520 560 aaPredicted RBP11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 VAX1Q5SQQ9 334 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 DHRS7BQ6IAN0 325 aaPredicted RBP11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 Q6ZPA2 131 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 IDO2Q6ZQW0 420 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 DYNAPQ8N1N2 210 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 OR4F5Q8NH21 305 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 PIFOQ8TCI5 191 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 LEAP2Q969E1 77 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 ST6GALNAC6Q969X2 333 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 MRGPRFQ96AM1 343 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 PRRT1Q99946 306 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 SEC22CQ9BRL7 303 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 SLC23A1Q9UHI7 598 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 SCP2D1Q9UJQ7 156 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 MMP24Q9Y5R2 645 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 M0QZK8 103 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 RAB29O14966 203 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 HRH1P35367 487 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 ACTBL2Q562R1 376 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 CT45A1Q5HYN5 189 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 C11orf88Q6PI97 169 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 OR52L2PQ8NGH6 319 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 OR10V1Q8NGI7 309 aa11.26□□□□□ -0.61
PKNOX1-209ENST00000560448 OR10J5Q8NHC4 309 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms