RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 RNF114Q9Y508 228 aa13.41□□□□□ -0.26
RPL28-209ENST00000560055 M0QZK8 103 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 TUSC2O75896 110 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 MOSP00540 346 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 GPR12P47775 334 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 HNF4GQ14541 408 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 C11orf88Q6PI97 169 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 C3orf56Q8N813 242 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 RBMXL1Q96E39 390 aaKnown RBP13.4□□□□□ -0.26
RPL28-209ENST00000560055 C5orf30Q96GV9 206 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 PRSS22Q9GZN4 317 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 OR2D2Q9H210 308 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 SCPEP1Q9HB40 452 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 PLSCR3Q9NRY6 295 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 SDHAF2Q9NX18 166 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 EXTL2Q9UBQ6 330 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 ZNF221Q9UK13 617 aa13.4□□□□□ -0.26
RPL28-209ENST00000560055 CCDC160A6NGH7 325 aa13.39□□□□□ -0.27
RPL28-209ENST00000560055 SULT1C2O00338 296 aa13.39□□□□□ -0.27
RPL28-209ENST00000560055 RGS5O15539 181 aa13.39□□□□□ -0.27
RPL28-209ENST00000560055 FGF16O43320 207 aa13.39□□□□□ -0.27
RPL28-209ENST00000560055 NFYAP23511 347 aaPredicted RBP13.39□□□□□ -0.27
RPL28-209ENST00000560055 ARPC4P59998 168 aa13.39□□□□□ -0.27
RPL28-209ENST00000560055 SNX29P2Q8IUI4 249 aa13.39□□□□□ -0.27
RPL28-209ENST00000560055 C5orf56Q8N8D9 126 aa13.39□□□□□ -0.27
RPL28-209ENST00000560055 OR5AP2Q8NGF4 316 aa13.39□□□□□ -0.27
RPL28-209ENST00000560055 OR5AN1Q8NGI8 311 aa13.39□□□□□ -0.27
RPL28-209ENST00000560055 OR2T6Q8NHC8 308 aa13.39□□□□□ -0.27
RPL28-209ENST00000560055 IFT46Q9NQC8 304 aa13.39□□□□□ -0.27
RPL28-209ENST00000560055 SERTAD4Q9NUC0 356 aa13.39□□□□□ -0.27
RPL28-209ENST00000560055 OR2W1Q9Y3N9 320 aa13.39□□□□□ -0.27
RPL28-209ENST00000560055 OR5H14A6NHG9 310 aa13.38□□□□□ -0.27
RPL28-209ENST00000560055 H0YJW9 148 aa13.38□□□□□ -0.27
RPL28-209ENST00000560055 FCER2P06734 321 aa13.38□□□□□ -0.27
RPL28-209ENST00000560055 ABCA11PQ4W5N1 156 aa13.38□□□□□ -0.27
RPL28-209ENST00000560055 OR8H1Q8NGG4 311 aa13.38□□□□□ -0.27
RPL28-209ENST00000560055 ABHD1Q96SE0 405 aa13.38□□□□□ -0.27
RPL28-209ENST00000560055 NECAP2Q9NVZ3 263 aa13.38□□□□□ -0.27
RPL28-209ENST00000560055 IGKV1D-13A0A0B4J2D9 117 aa13.37□□□□□ -0.27
RPL28-209ENST00000560055 OR5H8P0DN80 308 aa13.37□□□□□ -0.27
RPL28-209ENST00000560055 IGKV1-13P0DP09 117 aa13.37□□□□□ -0.27
RPL28-209ENST00000560055 KRTAP10-3P60369 221 aa13.37□□□□□ -0.27
RPL28-209ENST00000560055 CDK10Q15131 360 aa13.37□□□□□ -0.27
RPL28-209ENST00000560055 FAM131AQ6UXB0 335 aa13.37□□□□□ -0.27
RPL28-209ENST00000560055 GLDNQ6ZMI3 551 aaPredicted RBP13.37□□□□□ -0.27
RPL28-209ENST00000560055 OVCH2Q7RTZ1 564 aa13.37□□□□□ -0.27
RPL28-209ENST00000560055 LYSMD2Q8IV50 215 aa13.37□□□□□ -0.27
RPL28-209ENST00000560055 Q8N9W7 124 aa13.37□□□□□ -0.27
RPL28-209ENST00000560055 ZNF383Q8NA42 475 aa13.37□□□□□ -0.27
RPL28-209ENST00000560055 DRAXINQ8NBI3 349 aaPredicted RBP13.37□□□□□ -0.27
RPL28-209ENST00000560055 RITA1Q96K30 269 aa13.37□□□□□ -0.27
RPL28-209ENST00000560055 SH2D7A6NKC9 451 aaPredicted RBP13.36□□□□□ -0.27
RPL28-209ENST00000560055 M0R1X1 148 aa13.36□□□□□ -0.27
RPL28-209ENST00000560055 IGLV2-14P01704 120 aa13.36□□□□□ -0.27
RPL28-209ENST00000560055 MC5RP33032 325 aa13.36□□□□□ -0.27
RPL28-209ENST00000560055 LUMP51884 338 aaPredicted RBP13.36□□□□□ -0.27
RPL28-209ENST00000560055 F2RL1P55085 397 aa13.36□□□□□ -0.27
RPL28-209ENST00000560055 LINC00205P59089 165 aa13.36□□□□□ -0.27
RPL28-209ENST00000560055 FAM71E2Q8N5Q1 922 aa13.36□□□□□ -0.27
RPL28-209ENST00000560055 ZNF645Q8N7E2 425 aa13.36□□□□□ -0.27
RPL28-209ENST00000560055 MCFD2Q8NI22 146 aa13.36□□□□□ -0.27
RPL28-209ENST00000560055 WIPF2Q8TF74 440 aaPredicted RBP13.36□□□□□ -0.27
RPL28-209ENST00000560055 C15orf40Q8WUR7 153 aa13.36□□□□□ -0.27
RPL28-209ENST00000560055 WNT10AQ9GZT5 417 aa13.36□□□□□ -0.27
RPL28-209ENST00000560055 C6orf62Q9GZU0 229 aaPredicted RBP13.36□□□□□ -0.27
RPL28-209ENST00000560055 RBM7Q9Y580 266 aaKnown RBP13.36□□□□□ -0.27
RPL28-209ENST00000560055 PPYP01298 95 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 AADACP22760 399 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 FCGR2CP31995 323 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 RCVRNP35243 200 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 TAS2R46P59540 309 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 ACTBP60709 375 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 DYRK1AQ13627 763 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 TMEM95Q3KNT9 176 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 ZNF660Q6AZW8 331 aaPredicted RBP13.35□□□□□ -0.27
RPL28-209ENST00000560055 SHISA2Q6UWI4 295 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 DHRS11Q6UWP2 260 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 GIMAP1Q8WWP7 306 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 CITED1Q99966 193 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 DCUN1D5Q9BTE7 237 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 LIN7CQ9NUP9 197 aaKnown RBP13.35□□□□□ -0.27
RPL28-209ENST00000560055 WASHC3Q9Y3C0 194 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 A3GALT2U3KPV4 340 aa13.35□□□□□ -0.27
RPL28-209ENST00000560055 PKD1L1Q8TDX9 2849 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 DPPA5A6NC42 116 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 NCBP2LA6PVI3 153 aaKnown RBP13.34□□□□□ -0.27
RPL28-209ENST00000560055 SLC22A5O76082 557 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 IGKV1-16P04430 117 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 DUTP33316 252 aaKnown RBP13.34□□□□□ -0.27
RPL28-209ENST00000560055 VDAC2P45880 294 aaPredicted RBP13.34□□□□□ -0.27
RPL28-209ENST00000560055 RFX2P48378 723 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 SRSF4Q08170 494 aaKnown RBP13.34□□□□□ -0.27
RPL28-209ENST00000560055 FOXB2Q5VYV0 432 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 KLHDC1Q8N7A1 406 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 NPBQ8NG41 125 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 OR5H2Q8NGV7 314 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 OR52I2Q8NH67 350 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 DDB2Q92466 427 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 DIRAS2Q96HU8 199 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 SOSTQ9BQB4 213 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms